Gene : Medtr5g066960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  3599 Name:  ? Medtr5g066960
Secondary Identifier:  ? PAC:31085264
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g066960 0.5kb upstream 0.5kb upstream 686 true chr5: 28267629-28268314 Medicago truncatula
Medtr5g066960 0.5kb upstream 0.5kb upstream 500 false chr5: 28267629-28268128 Medicago truncatula
Medtr5g066960 0.5kb downstream 0.5kb downstream 686 true chr5: 28268129-28268814 Medicago truncatula
Medtr5g066960 0.5kb downstream 0.5kb downstream 500 false chr5: 28268315-28268814 Medicago truncatula
Medtr5g066960 1.0kb upstream 1.0kb upstream 1186 true chr5: 28267129-28268314 Medicago truncatula
Medtr5g066960 1.0kb upstream 1.0kb upstream 1000 false chr5: 28267129-28268128 Medicago truncatula
Medtr5g066960 1.0kb downstream 1.0kb downstream 1186 true chr5: 28268129-28269314 Medicago truncatula
Medtr5g066960 1.0kb downstream 1.0kb downstream 1000 false chr5: 28268315-28269314 Medicago truncatula
Medtr5g066960 2.0kb upstream 2.0kb upstream 2186 true chr5: 28266129-28268314 Medicago truncatula
Medtr5g066960 2.0kb upstream 2.0kb upstream 2000 false chr5: 28266129-28268128 Medicago truncatula
Medtr5g066960 2.0kb downstream 2.0kb downstream 2186 true chr5: 28268129-28270314 Medicago truncatula
Medtr5g066960 2.0kb downstream 2.0kb downstream 2000 false chr5: 28268315-28270314 Medicago truncatula
Medtr5g066960 5.0kb upstream 5.0kb upstream 5186 true chr5: 28263129-28268314 Medicago truncatula
Medtr5g066960 5.0kb upstream 5.0kb upstream 5000 false chr5: 28263129-28268128 Medicago truncatula
Medtr5g066960 5.0kb downstream 5.0kb downstream 5186 true chr5: 28268129-28273314 Medicago truncatula
Medtr5g066960 5.0kb downstream 5.0kb downstream 5000 false chr5: 28268315-28273314 Medicago truncatula
Medtr5g066960 10.0kb upstream 10.0kb upstream 10186 true chr5: 28258129-28268314 Medicago truncatula
Medtr5g066960 10.0kb upstream 10.0kb upstream 10000 false chr5: 28258129-28268128 Medicago truncatula
Medtr5g066960 10.0kb downstream 10.0kb downstream 10186 true chr5: 28268129-28278314 Medicago truncatula
Medtr5g066960 10.0kb downstream 10.0kb downstream 10000 false chr5: 28268315-28278314 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311203 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.043     High  
cufflinks 1.049        
cufflinks 0.284       Low
cufflinks 15.597     High  
cufflinks 0.205       Low
cufflinks 9.807        
cufflinks 32.854     High  
cufflinks 0.778        
cufflinks 35.079     High High

0 Strain