Gene : Medtr5g068860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13068:SF24 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Description:  transcription termination factor family protein
Genomic Order:  3706 Name:  ? Medtr5g068860
Secondary Identifier:  ? PAC:31087795
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g068860 0.5kb upstream 0.5kb upstream 2787 true chr5: 29163659-29166445 Medicago truncatula
Medtr5g068860 0.5kb upstream 0.5kb upstream 500 false chr5: 29165946-29166445 Medicago truncatula
Medtr5g068860 0.5kb downstream 0.5kb downstream 2787 true chr5: 29163159-29165945 Medicago truncatula
Medtr5g068860 0.5kb downstream 0.5kb downstream 500 false chr5: 29163159-29163658 Medicago truncatula
Medtr5g068860 1.0kb upstream 1.0kb upstream 3287 true chr5: 29163659-29166945 Medicago truncatula
Medtr5g068860 1.0kb upstream 1.0kb upstream 1000 false chr5: 29165946-29166945 Medicago truncatula
Medtr5g068860 1.0kb downstream 1.0kb downstream 3287 true chr5: 29162659-29165945 Medicago truncatula
Medtr5g068860 1.0kb downstream 1.0kb downstream 1000 false chr5: 29162659-29163658 Medicago truncatula
Medtr5g068860 2.0kb upstream 2.0kb upstream 4287 true chr5: 29163659-29167945 Medicago truncatula
Medtr5g068860 2.0kb upstream 2.0kb upstream 2000 false chr5: 29165946-29167945 Medicago truncatula
Medtr5g068860 2.0kb downstream 2.0kb downstream 4287 true chr5: 29161659-29165945 Medicago truncatula
Medtr5g068860 2.0kb downstream 2.0kb downstream 2000 false chr5: 29161659-29163658 Medicago truncatula
Medtr5g068860 5.0kb upstream 5.0kb upstream 7287 true chr5: 29163659-29170945 Medicago truncatula
Medtr5g068860 5.0kb upstream 5.0kb upstream 5000 false chr5: 29165946-29170945 Medicago truncatula
Medtr5g068860 5.0kb downstream 5.0kb downstream 7287 true chr5: 29158659-29165945 Medicago truncatula
Medtr5g068860 5.0kb downstream 5.0kb downstream 5000 false chr5: 29158659-29163658 Medicago truncatula
Medtr5g068860 10.0kb upstream 10.0kb upstream 12287 true chr5: 29163659-29175945 Medicago truncatula
Medtr5g068860 10.0kb upstream 10.0kb upstream 10000 false chr5: 29165946-29175945 Medicago truncatula
Medtr5g068860 10.0kb downstream 10.0kb downstream 12287 true chr5: 29153659-29165945 Medicago truncatula
Medtr5g068860 10.0kb downstream 10.0kb downstream 10000 false chr5: 29153659-29163658 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
122301679 5265 Fabidae View MSA
124061802 5270 Rosid View MSA
123747028 5271 Pentapetalae View MSA
122792069 5272 Eudicot View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.371        
cufflinks 10.309     High  
cufflinks 10.838     High  
cufflinks 2.652        
cufflinks 19.359     High High
cufflinks 0.235       Low
cufflinks 3.915        
cufflinks 10.607     High  
cufflinks 3.118        

0 Strain