Gene : Medtr5g069040 M. truncatula Mt4.0v1
Defline:  (1 of 88) PF00892 - EamA-like transporter family (EamA) Description:  nodulin MtN21/EamA-like transporter family protein
Genomic Order:  3715 Name:  ? Medtr5g069040
Secondary Identifier:  ? PAC:31086802
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g069040 0.5kb upstream 0.5kb upstream 5270 true chr5: 29222380-29227649 Medicago truncatula
Medtr5g069040 0.5kb upstream 0.5kb upstream 500 false chr5: 29227150-29227649 Medicago truncatula
Medtr5g069040 0.5kb downstream 0.5kb downstream 5270 true chr5: 29221880-29227149 Medicago truncatula
Medtr5g069040 0.5kb downstream 0.5kb downstream 500 false chr5: 29221880-29222379 Medicago truncatula
Medtr5g069040 1.0kb upstream 1.0kb upstream 5770 true chr5: 29222380-29228149 Medicago truncatula
Medtr5g069040 1.0kb upstream 1.0kb upstream 1000 false chr5: 29227150-29228149 Medicago truncatula
Medtr5g069040 1.0kb downstream 1.0kb downstream 5770 true chr5: 29221380-29227149 Medicago truncatula
Medtr5g069040 1.0kb downstream 1.0kb downstream 1000 false chr5: 29221380-29222379 Medicago truncatula
Medtr5g069040 2.0kb upstream 2.0kb upstream 6770 true chr5: 29222380-29229149 Medicago truncatula
Medtr5g069040 2.0kb upstream 2.0kb upstream 2000 false chr5: 29227150-29229149 Medicago truncatula
Medtr5g069040 2.0kb downstream 2.0kb downstream 6770 true chr5: 29220380-29227149 Medicago truncatula
Medtr5g069040 2.0kb downstream 2.0kb downstream 2000 false chr5: 29220380-29222379 Medicago truncatula
Medtr5g069040 5.0kb upstream 5.0kb upstream 9770 true chr5: 29222380-29232149 Medicago truncatula
Medtr5g069040 5.0kb upstream 5.0kb upstream 5000 false chr5: 29227150-29232149 Medicago truncatula
Medtr5g069040 5.0kb downstream 5.0kb downstream 9770 true chr5: 29217380-29227149 Medicago truncatula
Medtr5g069040 5.0kb downstream 5.0kb downstream 5000 false chr5: 29217380-29222379 Medicago truncatula
Medtr5g069040 10.0kb upstream 10.0kb upstream 14770 true chr5: 29222380-29237149 Medicago truncatula
Medtr5g069040 10.0kb upstream 10.0kb upstream 10000 false chr5: 29227150-29237149 Medicago truncatula
Medtr5g069040 10.0kb downstream 10.0kb downstream 14770 true chr5: 29212380-29227149 Medicago truncatula
Medtr5g069040 10.0kb downstream 10.0kb downstream 10000 false chr5: 29212380-29222379 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122308684 5265 Fabidae View MSA
124050671 5270 Rosid View MSA
123742527 5271 Pentapetalae View MSA
122770306 5272 Eudicot View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain