Gene : Medtr5g068600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11361:SF81 - DNA MISMATCH REPAIR PROTEIN MUTS, TYPE 2 Description:  DNA mismatch repair MUTS family protein
Genomic Order:  3687 Name:  ? Medtr5g068600
Secondary Identifier:  ? PAC:31091899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g068600 0.5kb upstream 0.5kb upstream 17823 true chr5: 29049181-29067003 Medicago truncatula
Medtr5g068600 0.5kb upstream 0.5kb upstream 500 false chr5: 29049181-29049680 Medicago truncatula
Medtr5g068600 0.5kb downstream 0.5kb downstream 17823 true chr5: 29049681-29067503 Medicago truncatula
Medtr5g068600 0.5kb downstream 0.5kb downstream 500 false chr5: 29067004-29067503 Medicago truncatula
Medtr5g068600 1.0kb upstream 1.0kb upstream 18323 true chr5: 29048681-29067003 Medicago truncatula
Medtr5g068600 1.0kb upstream 1.0kb upstream 1000 false chr5: 29048681-29049680 Medicago truncatula
Medtr5g068600 1.0kb downstream 1.0kb downstream 18323 true chr5: 29049681-29068003 Medicago truncatula
Medtr5g068600 1.0kb downstream 1.0kb downstream 1000 false chr5: 29067004-29068003 Medicago truncatula
Medtr5g068600 2.0kb upstream 2.0kb upstream 19323 true chr5: 29047681-29067003 Medicago truncatula
Medtr5g068600 2.0kb upstream 2.0kb upstream 2000 false chr5: 29047681-29049680 Medicago truncatula
Medtr5g068600 2.0kb downstream 2.0kb downstream 19323 true chr5: 29049681-29069003 Medicago truncatula
Medtr5g068600 2.0kb downstream 2.0kb downstream 2000 false chr5: 29067004-29069003 Medicago truncatula
Medtr5g068600 5.0kb upstream 5.0kb upstream 22323 true chr5: 29044681-29067003 Medicago truncatula
Medtr5g068600 5.0kb upstream 5.0kb upstream 5000 false chr5: 29044681-29049680 Medicago truncatula
Medtr5g068600 5.0kb downstream 5.0kb downstream 22323 true chr5: 29049681-29072003 Medicago truncatula
Medtr5g068600 5.0kb downstream 5.0kb downstream 5000 false chr5: 29067004-29072003 Medicago truncatula
Medtr5g068600 10.0kb upstream 10.0kb upstream 27323 true chr5: 29039681-29067003 Medicago truncatula
Medtr5g068600 10.0kb upstream 10.0kb upstream 10000 false chr5: 29039681-29049680 Medicago truncatula
Medtr5g068600 10.0kb downstream 10.0kb downstream 27323 true chr5: 29049681-29077003 Medicago truncatula
Medtr5g068600 10.0kb downstream 10.0kb downstream 10000 false chr5: 29067004-29077003 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306390 5265 Fabidae View MSA
124073530 5270 Rosid View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141        
cufflinks 0.235        
cufflinks 0.224        
cufflinks 0.02     Low Low
cufflinks 0.254        
cufflinks 0.026     Low Low
cufflinks 0.038     Low  
cufflinks 0.219        
cufflinks 0.022     Low Low

0 Strain