Gene : Medtr5g071990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11040:SF26 - ZINC TRANSPORTER 6, CHLOROPLASTIC Description:  ZIP zinc/iron transport family protein
Genomic Order:  3916 Name:  ? Medtr5g071990
Secondary Identifier:  ? PAC:31088150
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g071990 0.5kb upstream 0.5kb upstream 3394 true chr5: 30621245-30624638 Medicago truncatula
Medtr5g071990 0.5kb upstream 0.5kb upstream 500 false chr5: 30624139-30624638 Medicago truncatula
Medtr5g071990 0.5kb downstream 0.5kb downstream 3394 true chr5: 30620745-30624138 Medicago truncatula
Medtr5g071990 0.5kb downstream 0.5kb downstream 500 false chr5: 30620745-30621244 Medicago truncatula
Medtr5g071990 1.0kb upstream 1.0kb upstream 3894 true chr5: 30621245-30625138 Medicago truncatula
Medtr5g071990 1.0kb upstream 1.0kb upstream 1000 false chr5: 30624139-30625138 Medicago truncatula
Medtr5g071990 1.0kb downstream 1.0kb downstream 3894 true chr5: 30620245-30624138 Medicago truncatula
Medtr5g071990 1.0kb downstream 1.0kb downstream 1000 false chr5: 30620245-30621244 Medicago truncatula
Medtr5g071990 2.0kb upstream 2.0kb upstream 4894 true chr5: 30621245-30626138 Medicago truncatula
Medtr5g071990 2.0kb upstream 2.0kb upstream 2000 false chr5: 30624139-30626138 Medicago truncatula
Medtr5g071990 2.0kb downstream 2.0kb downstream 4894 true chr5: 30619245-30624138 Medicago truncatula
Medtr5g071990 2.0kb downstream 2.0kb downstream 2000 false chr5: 30619245-30621244 Medicago truncatula
Medtr5g071990 5.0kb upstream 5.0kb upstream 7894 true chr5: 30621245-30629138 Medicago truncatula
Medtr5g071990 5.0kb upstream 5.0kb upstream 5000 false chr5: 30624139-30629138 Medicago truncatula
Medtr5g071990 5.0kb downstream 5.0kb downstream 7894 true chr5: 30616245-30624138 Medicago truncatula
Medtr5g071990 5.0kb downstream 5.0kb downstream 5000 false chr5: 30616245-30621244 Medicago truncatula
Medtr5g071990 10.0kb upstream 10.0kb upstream 12894 true chr5: 30621245-30634138 Medicago truncatula
Medtr5g071990 10.0kb upstream 10.0kb upstream 10000 false chr5: 30624139-30634138 Medicago truncatula
Medtr5g071990 10.0kb downstream 10.0kb downstream 12894 true chr5: 30611245-30624138 Medicago truncatula
Medtr5g071990 10.0kb downstream 10.0kb downstream 10000 false chr5: 30611245-30621244 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311718 5265 Fabidae View MSA
124065982 5270 Rosid View MSA
123741321 5271 Pentapetalae View MSA
122790918 5272 Eudicot View MSA
122046721 5273 Angiosperm View MSA
121310647 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.539       Low
cufflinks 1.04        
cufflinks 1.406        
cufflinks 3.227       High
cufflinks 1.667        
cufflinks 0.93        
cufflinks 1.71        
cufflinks 1.04        
cufflinks 2.799       High

0 Strain