Gene : Medtr5g071170 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Description:  microsomal omega-3 fatty acid desaturase
Genomic Order:  3857 Name:  ? Medtr5g071170
Secondary Identifier:  ? PAC:31085743
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g071170 0.5kb upstream 0.5kb upstream 2833 true chr5: 30184947-30187779 Medicago truncatula
Medtr5g071170 0.5kb upstream 0.5kb upstream 500 false chr5: 30187280-30187779 Medicago truncatula
Medtr5g071170 0.5kb downstream 0.5kb downstream 2833 true chr5: 30184447-30187279 Medicago truncatula
Medtr5g071170 0.5kb downstream 0.5kb downstream 500 false chr5: 30184447-30184946 Medicago truncatula
Medtr5g071170 1.0kb upstream 1.0kb upstream 3333 true chr5: 30184947-30188279 Medicago truncatula
Medtr5g071170 1.0kb upstream 1.0kb upstream 1000 false chr5: 30187280-30188279 Medicago truncatula
Medtr5g071170 1.0kb downstream 1.0kb downstream 3333 true chr5: 30183947-30187279 Medicago truncatula
Medtr5g071170 1.0kb downstream 1.0kb downstream 1000 false chr5: 30183947-30184946 Medicago truncatula
Medtr5g071170 2.0kb upstream 2.0kb upstream 4333 true chr5: 30184947-30189279 Medicago truncatula
Medtr5g071170 2.0kb upstream 2.0kb upstream 2000 false chr5: 30187280-30189279 Medicago truncatula
Medtr5g071170 2.0kb downstream 2.0kb downstream 4333 true chr5: 30182947-30187279 Medicago truncatula
Medtr5g071170 2.0kb downstream 2.0kb downstream 2000 false chr5: 30182947-30184946 Medicago truncatula
Medtr5g071170 5.0kb upstream 5.0kb upstream 7333 true chr5: 30184947-30192279 Medicago truncatula
Medtr5g071170 5.0kb upstream 5.0kb upstream 5000 false chr5: 30187280-30192279 Medicago truncatula
Medtr5g071170 5.0kb downstream 5.0kb downstream 7333 true chr5: 30179947-30187279 Medicago truncatula
Medtr5g071170 5.0kb downstream 5.0kb downstream 5000 false chr5: 30179947-30184946 Medicago truncatula
Medtr5g071170 10.0kb upstream 10.0kb upstream 12333 true chr5: 30184947-30197279 Medicago truncatula
Medtr5g071170 10.0kb upstream 10.0kb upstream 10000 false chr5: 30187280-30197279 Medicago truncatula
Medtr5g071170 10.0kb downstream 10.0kb downstream 12333 true chr5: 30174947-30187279 Medicago truncatula
Medtr5g071170 10.0kb downstream 10.0kb downstream 10000 false chr5: 30174947-30184946 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low Low
cufflinks 1.491       High
cufflinks 0.733        
cufflinks 0.04     Low Low
cufflinks 0.755        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 1.268        
cufflinks 0.198        

0 Strain