Gene : Medtr5g071200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23244:SF249 - MANNOSE-BINDING LECTIN SUPERFAMILY PROTEIN Description:  mannose-binding lectin superfamily protein
Genomic Order:  3860 Name:  ? Medtr5g071200
Secondary Identifier:  ? PAC:31089932
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g071200 0.5kb upstream 0.5kb upstream 3420 true chr5: 30196490-30199909 Medicago truncatula
Medtr5g071200 0.5kb upstream 0.5kb upstream 500 false chr5: 30196490-30196989 Medicago truncatula
Medtr5g071200 0.5kb downstream 0.5kb downstream 3420 true chr5: 30196990-30200409 Medicago truncatula
Medtr5g071200 0.5kb downstream 0.5kb downstream 500 false chr5: 30199910-30200409 Medicago truncatula
Medtr5g071200 1.0kb upstream 1.0kb upstream 3920 true chr5: 30195990-30199909 Medicago truncatula
Medtr5g071200 1.0kb upstream 1.0kb upstream 1000 false chr5: 30195990-30196989 Medicago truncatula
Medtr5g071200 1.0kb downstream 1.0kb downstream 3920 true chr5: 30196990-30200909 Medicago truncatula
Medtr5g071200 1.0kb downstream 1.0kb downstream 1000 false chr5: 30199910-30200909 Medicago truncatula
Medtr5g071200 2.0kb upstream 2.0kb upstream 4920 true chr5: 30194990-30199909 Medicago truncatula
Medtr5g071200 2.0kb upstream 2.0kb upstream 2000 false chr5: 30194990-30196989 Medicago truncatula
Medtr5g071200 2.0kb downstream 2.0kb downstream 4920 true chr5: 30196990-30201909 Medicago truncatula
Medtr5g071200 2.0kb downstream 2.0kb downstream 2000 false chr5: 30199910-30201909 Medicago truncatula
Medtr5g071200 5.0kb upstream 5.0kb upstream 7920 true chr5: 30191990-30199909 Medicago truncatula
Medtr5g071200 5.0kb upstream 5.0kb upstream 5000 false chr5: 30191990-30196989 Medicago truncatula
Medtr5g071200 5.0kb downstream 5.0kb downstream 7920 true chr5: 30196990-30204909 Medicago truncatula
Medtr5g071200 5.0kb downstream 5.0kb downstream 5000 false chr5: 30199910-30204909 Medicago truncatula
Medtr5g071200 10.0kb upstream 10.0kb upstream 12920 true chr5: 30186990-30199909 Medicago truncatula
Medtr5g071200 10.0kb upstream 10.0kb upstream 10000 false chr5: 30186990-30196989 Medicago truncatula
Medtr5g071200 10.0kb downstream 10.0kb downstream 12920 true chr5: 30196990-30209909 Medicago truncatula
Medtr5g071200 10.0kb downstream 10.0kb downstream 10000 false chr5: 30199910-30209909 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310939 5265 Fabidae View MSA
124064423 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217       Low
cufflinks 1.042        
cufflinks 1.567        
cufflinks 2.465        
cufflinks 0.996        
cufflinks 3.511        
cufflinks 15.843     High High
cufflinks 1.431        
cufflinks 41.635     High High

0 Strain