Gene : Medtr5g070330 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Description:  vacuolar cation/proton exchanger 3
Genomic Order:  3808 Name:  ? Medtr5g070330
Secondary Identifier:  ? PAC:31090917
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g070330 0.5kb upstream 0.5kb upstream 5948 true chr5: 29782241-29788188 Medicago truncatula
Medtr5g070330 0.5kb upstream 0.5kb upstream 500 false chr5: 29787689-29788188 Medicago truncatula
Medtr5g070330 0.5kb downstream 0.5kb downstream 5948 true chr5: 29781741-29787688 Medicago truncatula
Medtr5g070330 0.5kb downstream 0.5kb downstream 500 false chr5: 29781741-29782240 Medicago truncatula
Medtr5g070330 1.0kb upstream 1.0kb upstream 6448 true chr5: 29782241-29788688 Medicago truncatula
Medtr5g070330 1.0kb upstream 1.0kb upstream 1000 false chr5: 29787689-29788688 Medicago truncatula
Medtr5g070330 1.0kb downstream 1.0kb downstream 6448 true chr5: 29781241-29787688 Medicago truncatula
Medtr5g070330 1.0kb downstream 1.0kb downstream 1000 false chr5: 29781241-29782240 Medicago truncatula
Medtr5g070330 2.0kb upstream 2.0kb upstream 7448 true chr5: 29782241-29789688 Medicago truncatula
Medtr5g070330 2.0kb upstream 2.0kb upstream 2000 false chr5: 29787689-29789688 Medicago truncatula
Medtr5g070330 2.0kb downstream 2.0kb downstream 7448 true chr5: 29780241-29787688 Medicago truncatula
Medtr5g070330 2.0kb downstream 2.0kb downstream 2000 false chr5: 29780241-29782240 Medicago truncatula
Medtr5g070330 5.0kb upstream 5.0kb upstream 10448 true chr5: 29782241-29792688 Medicago truncatula
Medtr5g070330 5.0kb upstream 5.0kb upstream 5000 false chr5: 29787689-29792688 Medicago truncatula
Medtr5g070330 5.0kb downstream 5.0kb downstream 10448 true chr5: 29777241-29787688 Medicago truncatula
Medtr5g070330 5.0kb downstream 5.0kb downstream 5000 false chr5: 29777241-29782240 Medicago truncatula
Medtr5g070330 10.0kb upstream 10.0kb upstream 15448 true chr5: 29782241-29797688 Medicago truncatula
Medtr5g070330 10.0kb upstream 10.0kb upstream 10000 false chr5: 29787689-29797688 Medicago truncatula
Medtr5g070330 10.0kb downstream 10.0kb downstream 15448 true chr5: 29772241-29787688 Medicago truncatula
Medtr5g070330 10.0kb downstream 10.0kb downstream 10000 false chr5: 29772241-29782240 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309507 5265 Fabidae View MSA
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 4.386        
cufflinks 3.51        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.014     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.092        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain