Gene : Medtr5g073210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11709:SF68 - LACCASE-13-RELATED Description:  laccase/diphenol oxidase family protein
Genomic Order:  3986 Name:  ? Medtr5g073210
Secondary Identifier:  ? PAC:31085639
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g073210 0.5kb upstream 0.5kb upstream 3625 true chr5: 31164098-31167722 Medicago truncatula
Medtr5g073210 0.5kb upstream 0.5kb upstream 500 false chr5: 31167223-31167722 Medicago truncatula
Medtr5g073210 0.5kb downstream 0.5kb downstream 3625 true chr5: 31163598-31167222 Medicago truncatula
Medtr5g073210 0.5kb downstream 0.5kb downstream 500 false chr5: 31163598-31164097 Medicago truncatula
Medtr5g073210 1.0kb upstream 1.0kb upstream 4125 true chr5: 31164098-31168222 Medicago truncatula
Medtr5g073210 1.0kb upstream 1.0kb upstream 1000 false chr5: 31167223-31168222 Medicago truncatula
Medtr5g073210 1.0kb downstream 1.0kb downstream 4125 true chr5: 31163098-31167222 Medicago truncatula
Medtr5g073210 1.0kb downstream 1.0kb downstream 1000 false chr5: 31163098-31164097 Medicago truncatula
Medtr5g073210 2.0kb upstream 2.0kb upstream 5125 true chr5: 31164098-31169222 Medicago truncatula
Medtr5g073210 2.0kb upstream 2.0kb upstream 2000 false chr5: 31167223-31169222 Medicago truncatula
Medtr5g073210 2.0kb downstream 2.0kb downstream 5125 true chr5: 31162098-31167222 Medicago truncatula
Medtr5g073210 2.0kb downstream 2.0kb downstream 2000 false chr5: 31162098-31164097 Medicago truncatula
Medtr5g073210 5.0kb upstream 5.0kb upstream 8125 true chr5: 31164098-31172222 Medicago truncatula
Medtr5g073210 5.0kb upstream 5.0kb upstream 5000 false chr5: 31167223-31172222 Medicago truncatula
Medtr5g073210 5.0kb downstream 5.0kb downstream 8125 true chr5: 31159098-31167222 Medicago truncatula
Medtr5g073210 5.0kb downstream 5.0kb downstream 5000 false chr5: 31159098-31164097 Medicago truncatula
Medtr5g073210 10.0kb upstream 10.0kb upstream 13125 true chr5: 31164098-31177222 Medicago truncatula
Medtr5g073210 10.0kb upstream 10.0kb upstream 10000 false chr5: 31167223-31177222 Medicago truncatula
Medtr5g073210 10.0kb downstream 10.0kb downstream 13125 true chr5: 31154098-31167222 Medicago truncatula
Medtr5g073210 10.0kb downstream 10.0kb downstream 10000 false chr5: 31154098-31164097 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752293 5271 Pentapetalae View MSA
122312602 5265 Fabidae View MSA
124075203 5270 Rosid View MSA
122774464 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.663        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.009        
cufflinks 5.227        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.76        

0 Strain