Gene : Medtr6g017215 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR24177:SF42 - ANKYRIN REPEAT FAMILY PROTEIN Description:  ankyrin repeat protein
Genomic Order:  904 Name:  ? Medtr6g017215
Secondary Identifier:  ? PAC:31101441
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g017215 0.5kb upstream 0.5kb upstream 2088 true chr6: 6857998-6860085 Medicago truncatula
Medtr6g017215 0.5kb upstream 0.5kb upstream 500 false chr6: 6859586-6860085 Medicago truncatula
Medtr6g017215 0.5kb downstream 0.5kb downstream 2088 true chr6: 6857498-6859585 Medicago truncatula
Medtr6g017215 0.5kb downstream 0.5kb downstream 500 false chr6: 6857498-6857997 Medicago truncatula
Medtr6g017215 1.0kb upstream 1.0kb upstream 2588 true chr6: 6857998-6860585 Medicago truncatula
Medtr6g017215 1.0kb upstream 1.0kb upstream 1000 false chr6: 6859586-6860585 Medicago truncatula
Medtr6g017215 1.0kb downstream 1.0kb downstream 2588 true chr6: 6856998-6859585 Medicago truncatula
Medtr6g017215 1.0kb downstream 1.0kb downstream 1000 false chr6: 6856998-6857997 Medicago truncatula
Medtr6g017215 2.0kb upstream 2.0kb upstream 3588 true chr6: 6857998-6861585 Medicago truncatula
Medtr6g017215 2.0kb upstream 2.0kb upstream 2000 false chr6: 6859586-6861585 Medicago truncatula
Medtr6g017215 2.0kb downstream 2.0kb downstream 3588 true chr6: 6855998-6859585 Medicago truncatula
Medtr6g017215 2.0kb downstream 2.0kb downstream 2000 false chr6: 6855998-6857997 Medicago truncatula
Medtr6g017215 5.0kb upstream 5.0kb upstream 6588 true chr6: 6857998-6864585 Medicago truncatula
Medtr6g017215 5.0kb upstream 5.0kb upstream 5000 false chr6: 6859586-6864585 Medicago truncatula
Medtr6g017215 5.0kb downstream 5.0kb downstream 6588 true chr6: 6852998-6859585 Medicago truncatula
Medtr6g017215 5.0kb downstream 5.0kb downstream 5000 false chr6: 6852998-6857997 Medicago truncatula
Medtr6g017215 10.0kb upstream 10.0kb upstream 11588 true chr6: 6857998-6869585 Medicago truncatula
Medtr6g017215 10.0kb upstream 10.0kb upstream 10000 false chr6: 6859586-6869585 Medicago truncatula
Medtr6g017215 10.0kb downstream 10.0kb downstream 11588 true chr6: 6847998-6859585 Medicago truncatula
Medtr6g017215 10.0kb downstream 10.0kb downstream 10000 false chr6: 6847998-6857997 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315215 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.268       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.126        

0 Strain