Gene : Medtr6g018720 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  952 Name:  ? Medtr6g018720
Secondary Identifier:  ? PAC:31104819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g018720 0.5kb upstream 0.5kb upstream 4877 true chr6: 7209580-7214456 Medicago truncatula
Medtr6g018720 0.5kb upstream 0.5kb upstream 500 false chr6: 7213957-7214456 Medicago truncatula
Medtr6g018720 0.5kb downstream 0.5kb downstream 4877 true chr6: 7209080-7213956 Medicago truncatula
Medtr6g018720 0.5kb downstream 0.5kb downstream 500 false chr6: 7209080-7209579 Medicago truncatula
Medtr6g018720 1.0kb upstream 1.0kb upstream 5377 true chr6: 7209580-7214956 Medicago truncatula
Medtr6g018720 1.0kb upstream 1.0kb upstream 1000 false chr6: 7213957-7214956 Medicago truncatula
Medtr6g018720 1.0kb downstream 1.0kb downstream 5377 true chr6: 7208580-7213956 Medicago truncatula
Medtr6g018720 1.0kb downstream 1.0kb downstream 1000 false chr6: 7208580-7209579 Medicago truncatula
Medtr6g018720 2.0kb upstream 2.0kb upstream 6377 true chr6: 7209580-7215956 Medicago truncatula
Medtr6g018720 2.0kb upstream 2.0kb upstream 2000 false chr6: 7213957-7215956 Medicago truncatula
Medtr6g018720 2.0kb downstream 2.0kb downstream 6377 true chr6: 7207580-7213956 Medicago truncatula
Medtr6g018720 2.0kb downstream 2.0kb downstream 2000 false chr6: 7207580-7209579 Medicago truncatula
Medtr6g018720 5.0kb upstream 5.0kb upstream 9377 true chr6: 7209580-7218956 Medicago truncatula
Medtr6g018720 5.0kb upstream 5.0kb upstream 5000 false chr6: 7213957-7218956 Medicago truncatula
Medtr6g018720 5.0kb downstream 5.0kb downstream 9377 true chr6: 7204580-7213956 Medicago truncatula
Medtr6g018720 5.0kb downstream 5.0kb downstream 5000 false chr6: 7204580-7209579 Medicago truncatula
Medtr6g018720 10.0kb upstream 10.0kb upstream 14377 true chr6: 7209580-7223956 Medicago truncatula
Medtr6g018720 10.0kb upstream 10.0kb upstream 10000 false chr6: 7213957-7223956 Medicago truncatula
Medtr6g018720 10.0kb downstream 10.0kb downstream 14377 true chr6: 7199580-7213956 Medicago truncatula
Medtr6g018720 10.0kb downstream 10.0kb downstream 10000 false chr6: 7199580-7209579 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302792 5265 Fabidae View MSA
124061918 5270 Rosid View MSA
123736716 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.42        
cufflinks 1.053        
cufflinks 1.901       High
cufflinks 0.08       Low
cufflinks 1.87       High
cufflinks 0.201        
cufflinks 0.295        
cufflinks 1.31        
cufflinks 0.166        

0 Strain