Gene : Medtr6g021790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24073:SF597 - RAS-RELATED PROTEIN RABB1B Description:  small GTPase family RAB protein
Genomic Order:  981 Name:  ? Medtr6g021790
Secondary Identifier:  ? PAC:31105419
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g021790 0.5kb upstream 0.5kb upstream 6384 true chr6: 7508570-7514953 Medicago truncatula
Medtr6g021790 0.5kb upstream 0.5kb upstream 500 false chr6: 7514454-7514953 Medicago truncatula
Medtr6g021790 0.5kb downstream 0.5kb downstream 6384 true chr6: 7508070-7514453 Medicago truncatula
Medtr6g021790 0.5kb downstream 0.5kb downstream 500 false chr6: 7508070-7508569 Medicago truncatula
Medtr6g021790 1.0kb upstream 1.0kb upstream 6884 true chr6: 7508570-7515453 Medicago truncatula
Medtr6g021790 1.0kb upstream 1.0kb upstream 1000 false chr6: 7514454-7515453 Medicago truncatula
Medtr6g021790 1.0kb downstream 1.0kb downstream 6884 true chr6: 7507570-7514453 Medicago truncatula
Medtr6g021790 1.0kb downstream 1.0kb downstream 1000 false chr6: 7507570-7508569 Medicago truncatula
Medtr6g021790 2.0kb upstream 2.0kb upstream 7884 true chr6: 7508570-7516453 Medicago truncatula
Medtr6g021790 2.0kb upstream 2.0kb upstream 2000 false chr6: 7514454-7516453 Medicago truncatula
Medtr6g021790 2.0kb downstream 2.0kb downstream 7884 true chr6: 7506570-7514453 Medicago truncatula
Medtr6g021790 2.0kb downstream 2.0kb downstream 2000 false chr6: 7506570-7508569 Medicago truncatula
Medtr6g021790 5.0kb upstream 5.0kb upstream 10884 true chr6: 7508570-7519453 Medicago truncatula
Medtr6g021790 5.0kb upstream 5.0kb upstream 5000 false chr6: 7514454-7519453 Medicago truncatula
Medtr6g021790 5.0kb downstream 5.0kb downstream 10884 true chr6: 7503570-7514453 Medicago truncatula
Medtr6g021790 5.0kb downstream 5.0kb downstream 5000 false chr6: 7503570-7508569 Medicago truncatula
Medtr6g021790 10.0kb upstream 10.0kb upstream 15884 true chr6: 7508570-7524453 Medicago truncatula
Medtr6g021790 10.0kb upstream 10.0kb upstream 10000 false chr6: 7514454-7524453 Medicago truncatula
Medtr6g021790 10.0kb downstream 10.0kb downstream 15884 true chr6: 7498570-7514453 Medicago truncatula
Medtr6g021790 10.0kb downstream 10.0kb downstream 10000 false chr6: 7498570-7508569 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303883 5265 Fabidae View MSA
124067006 5270 Rosid View MSA
123745328 5271 Pentapetalae View MSA
122797849 5272 Eudicot View MSA
122043695 5273 Angiosperm View MSA
121349962 5274 Embryophyte View MSA
123426577 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.243        
cufflinks 4.533       Low
cufflinks 7.736       High
cufflinks 8.567       High
cufflinks 6.02        
cufflinks 5.182        
cufflinks 6.868        
cufflinks 5.302        
cufflinks 6.292        

0 Strain