Gene : Medtr6g023580 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1081
Name:  ? Medtr6g023580 Secondary Identifier:  ? PAC:31105568
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g023580 0.5kb upstream 0.5kb upstream 4030 true chr6: 8251608-8255637 Medicago truncatula
Medtr6g023580 0.5kb upstream 0.5kb upstream 500 false chr6: 8251608-8252107 Medicago truncatula
Medtr6g023580 0.5kb downstream 0.5kb downstream 4030 true chr6: 8252108-8256137 Medicago truncatula
Medtr6g023580 0.5kb downstream 0.5kb downstream 500 false chr6: 8255638-8256137 Medicago truncatula
Medtr6g023580 1.0kb upstream 1.0kb upstream 4530 true chr6: 8251108-8255637 Medicago truncatula
Medtr6g023580 1.0kb upstream 1.0kb upstream 1000 false chr6: 8251108-8252107 Medicago truncatula
Medtr6g023580 1.0kb downstream 1.0kb downstream 4530 true chr6: 8252108-8256637 Medicago truncatula
Medtr6g023580 1.0kb downstream 1.0kb downstream 1000 false chr6: 8255638-8256637 Medicago truncatula
Medtr6g023580 2.0kb upstream 2.0kb upstream 5530 true chr6: 8250108-8255637 Medicago truncatula
Medtr6g023580 2.0kb upstream 2.0kb upstream 2000 false chr6: 8250108-8252107 Medicago truncatula
Medtr6g023580 2.0kb downstream 2.0kb downstream 5530 true chr6: 8252108-8257637 Medicago truncatula
Medtr6g023580 2.0kb downstream 2.0kb downstream 2000 false chr6: 8255638-8257637 Medicago truncatula
Medtr6g023580 5.0kb upstream 5.0kb upstream 8530 true chr6: 8247108-8255637 Medicago truncatula
Medtr6g023580 5.0kb upstream 5.0kb upstream 5000 false chr6: 8247108-8252107 Medicago truncatula
Medtr6g023580 5.0kb downstream 5.0kb downstream 8530 true chr6: 8252108-8260637 Medicago truncatula
Medtr6g023580 5.0kb downstream 5.0kb downstream 5000 false chr6: 8255638-8260637 Medicago truncatula
Medtr6g023580 10.0kb upstream 10.0kb upstream 13530 true chr6: 8242108-8255637 Medicago truncatula
Medtr6g023580 10.0kb upstream 10.0kb upstream 10000 false chr6: 8242108-8252107 Medicago truncatula
Medtr6g023580 10.0kb downstream 10.0kb downstream 13530 true chr6: 8252108-8265637 Medicago truncatula
Medtr6g023580 10.0kb downstream 10.0kb downstream 10000 false chr6: 8255638-8265637 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310430 5265 Fabidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.409     High High
cufflinks 5.008        
cufflinks 10.045     High  
cufflinks 5.716        
cufflinks 7.197        
cufflinks 5.254        
cufflinks 9.538        
cufflinks 4.664        
cufflinks 9.599        

0 Strain