Gene : Medtr6g027540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10024:SF172 - C2 AND PLANT PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  1254 Name:  ? Medtr6g027540
Secondary Identifier:  ? PAC:31105703
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g027540 0.5kb upstream 0.5kb upstream 4491 true chr6: 9525955-9530445 Medicago truncatula
Medtr6g027540 0.5kb upstream 0.5kb upstream 500 false chr6: 9525955-9526454 Medicago truncatula
Medtr6g027540 0.5kb downstream 0.5kb downstream 4491 true chr6: 9526455-9530945 Medicago truncatula
Medtr6g027540 0.5kb downstream 0.5kb downstream 500 false chr6: 9530446-9530945 Medicago truncatula
Medtr6g027540 1.0kb upstream 1.0kb upstream 4991 true chr6: 9525455-9530445 Medicago truncatula
Medtr6g027540 1.0kb upstream 1.0kb upstream 1000 false chr6: 9525455-9526454 Medicago truncatula
Medtr6g027540 1.0kb downstream 1.0kb downstream 4991 true chr6: 9526455-9531445 Medicago truncatula
Medtr6g027540 1.0kb downstream 1.0kb downstream 1000 false chr6: 9530446-9531445 Medicago truncatula
Medtr6g027540 2.0kb upstream 2.0kb upstream 5991 true chr6: 9524455-9530445 Medicago truncatula
Medtr6g027540 2.0kb upstream 2.0kb upstream 2000 false chr6: 9524455-9526454 Medicago truncatula
Medtr6g027540 2.0kb downstream 2.0kb downstream 5991 true chr6: 9526455-9532445 Medicago truncatula
Medtr6g027540 2.0kb downstream 2.0kb downstream 2000 false chr6: 9530446-9532445 Medicago truncatula
Medtr6g027540 5.0kb upstream 5.0kb upstream 8991 true chr6: 9521455-9530445 Medicago truncatula
Medtr6g027540 5.0kb upstream 5.0kb upstream 5000 false chr6: 9521455-9526454 Medicago truncatula
Medtr6g027540 5.0kb downstream 5.0kb downstream 8991 true chr6: 9526455-9535445 Medicago truncatula
Medtr6g027540 5.0kb downstream 5.0kb downstream 5000 false chr6: 9530446-9535445 Medicago truncatula
Medtr6g027540 10.0kb upstream 10.0kb upstream 13991 true chr6: 9516455-9530445 Medicago truncatula
Medtr6g027540 10.0kb upstream 10.0kb upstream 10000 false chr6: 9516455-9526454 Medicago truncatula
Medtr6g027540 10.0kb downstream 10.0kb downstream 13991 true chr6: 9526455-9540445 Medicago truncatula
Medtr6g027540 10.0kb downstream 10.0kb downstream 10000 false chr6: 9530446-9540445 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299390 5265 Fabidae View MSA
124063540 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.875        
cufflinks 0.438        
cufflinks 0.644        
cufflinks 0.372        
cufflinks 0.418        
cufflinks 0.442        
cufflinks 1.324       High
cufflinks 0.573        
cufflinks 2.076       High

0 Strain