Gene : Medtr6g026870 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Description:  PQ-loop protein/transmembrane family protein
Genomic Order:  1207 Name:  ? Medtr6g026870
Secondary Identifier:  ? PAC:31102226
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g026870 0.5kb upstream 0.5kb upstream 5007 true chr6: 9071415-9076421 Medicago truncatula
Medtr6g026870 0.5kb upstream 0.5kb upstream 500 false chr6: 9075922-9076421 Medicago truncatula
Medtr6g026870 0.5kb downstream 0.5kb downstream 5007 true chr6: 9070915-9075921 Medicago truncatula
Medtr6g026870 0.5kb downstream 0.5kb downstream 500 false chr6: 9070915-9071414 Medicago truncatula
Medtr6g026870 1.0kb upstream 1.0kb upstream 5507 true chr6: 9071415-9076921 Medicago truncatula
Medtr6g026870 1.0kb upstream 1.0kb upstream 1000 false chr6: 9075922-9076921 Medicago truncatula
Medtr6g026870 1.0kb downstream 1.0kb downstream 5507 true chr6: 9070415-9075921 Medicago truncatula
Medtr6g026870 1.0kb downstream 1.0kb downstream 1000 false chr6: 9070415-9071414 Medicago truncatula
Medtr6g026870 2.0kb upstream 2.0kb upstream 6507 true chr6: 9071415-9077921 Medicago truncatula
Medtr6g026870 2.0kb upstream 2.0kb upstream 2000 false chr6: 9075922-9077921 Medicago truncatula
Medtr6g026870 2.0kb downstream 2.0kb downstream 6507 true chr6: 9069415-9075921 Medicago truncatula
Medtr6g026870 2.0kb downstream 2.0kb downstream 2000 false chr6: 9069415-9071414 Medicago truncatula
Medtr6g026870 5.0kb upstream 5.0kb upstream 9507 true chr6: 9071415-9080921 Medicago truncatula
Medtr6g026870 5.0kb upstream 5.0kb upstream 5000 false chr6: 9075922-9080921 Medicago truncatula
Medtr6g026870 5.0kb downstream 5.0kb downstream 9507 true chr6: 9066415-9075921 Medicago truncatula
Medtr6g026870 5.0kb downstream 5.0kb downstream 5000 false chr6: 9066415-9071414 Medicago truncatula
Medtr6g026870 10.0kb upstream 10.0kb upstream 14507 true chr6: 9071415-9085921 Medicago truncatula
Medtr6g026870 10.0kb upstream 10.0kb upstream 10000 false chr6: 9075922-9085921 Medicago truncatula
Medtr6g026870 10.0kb downstream 10.0kb downstream 14507 true chr6: 9061415-9075921 Medicago truncatula
Medtr6g026870 10.0kb downstream 10.0kb downstream 10000 false chr6: 9061415-9071414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295272 5265 Fabidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.422       High
cufflinks 0.392       Low
cufflinks 0.764        
cufflinks 1.306        
cufflinks 0.701        
cufflinks 0.73        
cufflinks 1.63       High
cufflinks 0.87        
cufflinks 0.948        

0 Strain