Gene : Medtr6g027900 M. truncatula Mt4.0v1
Defline:  (1 of 9) 3.2.1.1 - Alpha-amylase / Glycogenase Description:  alpha-amylase, putative
Genomic Order:  1280 Name:  ? Medtr6g027900
Secondary Identifier:  ? PAC:31103808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g027900 0.5kb upstream 0.5kb upstream 1125 true chr6: 9821906-9823030 Medicago truncatula
Medtr6g027900 0.5kb upstream 0.5kb upstream 500 false chr6: 9821906-9822405 Medicago truncatula
Medtr6g027900 0.5kb downstream 0.5kb downstream 1125 true chr6: 9822406-9823530 Medicago truncatula
Medtr6g027900 0.5kb downstream 0.5kb downstream 500 false chr6: 9823031-9823530 Medicago truncatula
Medtr6g027900 1.0kb upstream 1.0kb upstream 1625 true chr6: 9821406-9823030 Medicago truncatula
Medtr6g027900 1.0kb upstream 1.0kb upstream 1000 false chr6: 9821406-9822405 Medicago truncatula
Medtr6g027900 1.0kb downstream 1.0kb downstream 1625 true chr6: 9822406-9824030 Medicago truncatula
Medtr6g027900 1.0kb downstream 1.0kb downstream 1000 false chr6: 9823031-9824030 Medicago truncatula
Medtr6g027900 2.0kb upstream 2.0kb upstream 2625 true chr6: 9820406-9823030 Medicago truncatula
Medtr6g027900 2.0kb upstream 2.0kb upstream 2000 false chr6: 9820406-9822405 Medicago truncatula
Medtr6g027900 2.0kb downstream 2.0kb downstream 2625 true chr6: 9822406-9825030 Medicago truncatula
Medtr6g027900 2.0kb downstream 2.0kb downstream 2000 false chr6: 9823031-9825030 Medicago truncatula
Medtr6g027900 5.0kb upstream 5.0kb upstream 5625 true chr6: 9817406-9823030 Medicago truncatula
Medtr6g027900 5.0kb upstream 5.0kb upstream 5000 false chr6: 9817406-9822405 Medicago truncatula
Medtr6g027900 5.0kb downstream 5.0kb downstream 5625 true chr6: 9822406-9828030 Medicago truncatula
Medtr6g027900 5.0kb downstream 5.0kb downstream 5000 false chr6: 9823031-9828030 Medicago truncatula
Medtr6g027900 10.0kb upstream 10.0kb upstream 10625 true chr6: 9812406-9823030 Medicago truncatula
Medtr6g027900 10.0kb upstream 10.0kb upstream 10000 false chr6: 9812406-9822405 Medicago truncatula
Medtr6g027900 10.0kb downstream 10.0kb downstream 10625 true chr6: 9822406-9833030 Medicago truncatula
Medtr6g027900 10.0kb downstream 10.0kb downstream 10000 false chr6: 9823031-9833030 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121627601 5273 Angiosperm Singleton cluster - no MSA
122265776 5265 Fabidae Singleton cluster - no MSA
124006809 5270 Rosid Singleton cluster - no MSA
123580849 5271 Pentapetalae Singleton cluster - no MSA
122615554 5272 Eudicot Singleton cluster - no MSA
120899705 5274 Embryophyte Singleton cluster - no MSA
122940360 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain