Gene : Medtr6g033065 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF3 - OTU DOMAIN CONTAINING PROTEIN Description:  cysteine proteinase superfamily protein
Genomic Order:  1347 Name:  ? Medtr6g033065
Secondary Identifier:  ? PAC:31102740
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g033065 0.5kb upstream 0.5kb upstream 5596 true chr6: 10391160-10396755 Medicago truncatula
Medtr6g033065 0.5kb upstream 0.5kb upstream 500 false chr6: 10396256-10396755 Medicago truncatula
Medtr6g033065 0.5kb downstream 0.5kb downstream 5596 true chr6: 10390660-10396255 Medicago truncatula
Medtr6g033065 0.5kb downstream 0.5kb downstream 500 false chr6: 10390660-10391159 Medicago truncatula
Medtr6g033065 1.0kb upstream 1.0kb upstream 6096 true chr6: 10391160-10397255 Medicago truncatula
Medtr6g033065 1.0kb upstream 1.0kb upstream 1000 false chr6: 10396256-10397255 Medicago truncatula
Medtr6g033065 1.0kb downstream 1.0kb downstream 6096 true chr6: 10390160-10396255 Medicago truncatula
Medtr6g033065 1.0kb downstream 1.0kb downstream 1000 false chr6: 10390160-10391159 Medicago truncatula
Medtr6g033065 2.0kb upstream 2.0kb upstream 7096 true chr6: 10391160-10398255 Medicago truncatula
Medtr6g033065 2.0kb upstream 2.0kb upstream 2000 false chr6: 10396256-10398255 Medicago truncatula
Medtr6g033065 2.0kb downstream 2.0kb downstream 7096 true chr6: 10389160-10396255 Medicago truncatula
Medtr6g033065 2.0kb downstream 2.0kb downstream 2000 false chr6: 10389160-10391159 Medicago truncatula
Medtr6g033065 5.0kb upstream 5.0kb upstream 10096 true chr6: 10391160-10401255 Medicago truncatula
Medtr6g033065 5.0kb upstream 5.0kb upstream 5000 false chr6: 10396256-10401255 Medicago truncatula
Medtr6g033065 5.0kb downstream 5.0kb downstream 10096 true chr6: 10386160-10396255 Medicago truncatula
Medtr6g033065 5.0kb downstream 5.0kb downstream 5000 false chr6: 10386160-10391159 Medicago truncatula
Medtr6g033065 10.0kb upstream 10.0kb upstream 15096 true chr6: 10391160-10406255 Medicago truncatula
Medtr6g033065 10.0kb upstream 10.0kb upstream 10000 false chr6: 10396256-10406255 Medicago truncatula
Medtr6g033065 10.0kb downstream 10.0kb downstream 15096 true chr6: 10381160-10396255 Medicago truncatula
Medtr6g033065 10.0kb downstream 10.0kb downstream 10000 false chr6: 10381160-10391159 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312496 5265 Fabidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.74       High
cufflinks 3.406        
cufflinks 4.312        
cufflinks 4.376        
cufflinks 3.29        
cufflinks 2.192       Low
cufflinks 10.794     High High
cufflinks 4.018        
cufflinks 6.93        

0 Strain