Gene : Medtr6g032960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22763:SF39 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Description:  C3HC4-type RING zinc finger protein
Genomic Order:  1333 Name:  ? Medtr6g032960
Secondary Identifier:  ? PAC:31102055
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g032960 0.5kb upstream 0.5kb upstream 1484 true chr6: 10270309-10271792 Medicago truncatula
Medtr6g032960 0.5kb upstream 0.5kb upstream 500 false chr6: 10270309-10270808 Medicago truncatula
Medtr6g032960 0.5kb downstream 0.5kb downstream 1484 true chr6: 10270809-10272292 Medicago truncatula
Medtr6g032960 0.5kb downstream 0.5kb downstream 500 false chr6: 10271793-10272292 Medicago truncatula
Medtr6g032960 1.0kb upstream 1.0kb upstream 1984 true chr6: 10269809-10271792 Medicago truncatula
Medtr6g032960 1.0kb upstream 1.0kb upstream 1000 false chr6: 10269809-10270808 Medicago truncatula
Medtr6g032960 1.0kb downstream 1.0kb downstream 1984 true chr6: 10270809-10272792 Medicago truncatula
Medtr6g032960 1.0kb downstream 1.0kb downstream 1000 false chr6: 10271793-10272792 Medicago truncatula
Medtr6g032960 2.0kb upstream 2.0kb upstream 2984 true chr6: 10268809-10271792 Medicago truncatula
Medtr6g032960 2.0kb upstream 2.0kb upstream 2000 false chr6: 10268809-10270808 Medicago truncatula
Medtr6g032960 2.0kb downstream 2.0kb downstream 2984 true chr6: 10270809-10273792 Medicago truncatula
Medtr6g032960 2.0kb downstream 2.0kb downstream 2000 false chr6: 10271793-10273792 Medicago truncatula
Medtr6g032960 5.0kb upstream 5.0kb upstream 5984 true chr6: 10265809-10271792 Medicago truncatula
Medtr6g032960 5.0kb upstream 5.0kb upstream 5000 false chr6: 10265809-10270808 Medicago truncatula
Medtr6g032960 5.0kb downstream 5.0kb downstream 5984 true chr6: 10270809-10276792 Medicago truncatula
Medtr6g032960 5.0kb downstream 5.0kb downstream 5000 false chr6: 10271793-10276792 Medicago truncatula
Medtr6g032960 10.0kb upstream 10.0kb upstream 10984 true chr6: 10260809-10271792 Medicago truncatula
Medtr6g032960 10.0kb upstream 10.0kb upstream 10000 false chr6: 10260809-10270808 Medicago truncatula
Medtr6g032960 10.0kb downstream 10.0kb downstream 10984 true chr6: 10270809-10281792 Medicago truncatula
Medtr6g032960 10.0kb downstream 10.0kb downstream 10000 false chr6: 10271793-10281792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309509 5265 Fabidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain