Gene : Medtr6g029460 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.4.1.2 - Glutamate dehydrogenase / Glutamic dehydrogenase Description:  NADP-specific glutamate dehydrogenase
Genomic Order:  1316 Name:  ? Medtr6g029460
Secondary Identifier:  ? PAC:31102617
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUTAMATE-DEG1-PWY Medicago truncatula pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g029460 0.5kb upstream 0.5kb upstream 4509 true chr6: 10149349-10153857 Medicago truncatula
Medtr6g029460 0.5kb upstream 0.5kb upstream 500 false chr6: 10149349-10149848 Medicago truncatula
Medtr6g029460 0.5kb downstream 0.5kb downstream 4509 true chr6: 10149849-10154357 Medicago truncatula
Medtr6g029460 0.5kb downstream 0.5kb downstream 500 false chr6: 10153858-10154357 Medicago truncatula
Medtr6g029460 1.0kb upstream 1.0kb upstream 5009 true chr6: 10148849-10153857 Medicago truncatula
Medtr6g029460 1.0kb upstream 1.0kb upstream 1000 false chr6: 10148849-10149848 Medicago truncatula
Medtr6g029460 1.0kb downstream 1.0kb downstream 5009 true chr6: 10149849-10154857 Medicago truncatula
Medtr6g029460 1.0kb downstream 1.0kb downstream 1000 false chr6: 10153858-10154857 Medicago truncatula
Medtr6g029460 2.0kb upstream 2.0kb upstream 6009 true chr6: 10147849-10153857 Medicago truncatula
Medtr6g029460 2.0kb upstream 2.0kb upstream 2000 false chr6: 10147849-10149848 Medicago truncatula
Medtr6g029460 2.0kb downstream 2.0kb downstream 6009 true chr6: 10149849-10155857 Medicago truncatula
Medtr6g029460 2.0kb downstream 2.0kb downstream 2000 false chr6: 10153858-10155857 Medicago truncatula
Medtr6g029460 5.0kb upstream 5.0kb upstream 9009 true chr6: 10144849-10153857 Medicago truncatula
Medtr6g029460 5.0kb upstream 5.0kb upstream 5000 false chr6: 10144849-10149848 Medicago truncatula
Medtr6g029460 5.0kb downstream 5.0kb downstream 9009 true chr6: 10149849-10158857 Medicago truncatula
Medtr6g029460 5.0kb downstream 5.0kb downstream 5000 false chr6: 10153858-10158857 Medicago truncatula
Medtr6g029460 10.0kb upstream 10.0kb upstream 14009 true chr6: 10139849-10153857 Medicago truncatula
Medtr6g029460 10.0kb upstream 10.0kb upstream 10000 false chr6: 10139849-10149848 Medicago truncatula
Medtr6g029460 10.0kb downstream 10.0kb downstream 14009 true chr6: 10149849-10163857 Medicago truncatula
Medtr6g029460 10.0kb downstream 10.0kb downstream 10000 false chr6: 10153858-10163857 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313991 5265 Fabidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.104     High  
cufflinks 36.772     High  
cufflinks 15.631     High  
cufflinks 25.196     High  
cufflinks 1.663       Low
cufflinks 51.649     High  
cufflinks 112.639     High High
cufflinks 30.177     High  
cufflinks 48.475     High  

0 Strain