Gene : Medtr6g029390 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR34132:SF1 - EMB Description:  methyltransferase-like protein
Genomic Order:  1311 Name:  ? Medtr6g029390
Secondary Identifier:  ? PAC:31104818
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g029390 0.5kb upstream 0.5kb upstream 1889 true chr6: 10133839-10135727 Medicago truncatula
Medtr6g029390 0.5kb upstream 0.5kb upstream 500 false chr6: 10135228-10135727 Medicago truncatula
Medtr6g029390 0.5kb downstream 0.5kb downstream 1889 true chr6: 10133339-10135227 Medicago truncatula
Medtr6g029390 0.5kb downstream 0.5kb downstream 500 false chr6: 10133339-10133838 Medicago truncatula
Medtr6g029390 1.0kb upstream 1.0kb upstream 2389 true chr6: 10133839-10136227 Medicago truncatula
Medtr6g029390 1.0kb upstream 1.0kb upstream 1000 false chr6: 10135228-10136227 Medicago truncatula
Medtr6g029390 1.0kb downstream 1.0kb downstream 2389 true chr6: 10132839-10135227 Medicago truncatula
Medtr6g029390 1.0kb downstream 1.0kb downstream 1000 false chr6: 10132839-10133838 Medicago truncatula
Medtr6g029390 2.0kb upstream 2.0kb upstream 3389 true chr6: 10133839-10137227 Medicago truncatula
Medtr6g029390 2.0kb upstream 2.0kb upstream 2000 false chr6: 10135228-10137227 Medicago truncatula
Medtr6g029390 2.0kb downstream 2.0kb downstream 3389 true chr6: 10131839-10135227 Medicago truncatula
Medtr6g029390 2.0kb downstream 2.0kb downstream 2000 false chr6: 10131839-10133838 Medicago truncatula
Medtr6g029390 5.0kb upstream 5.0kb upstream 6389 true chr6: 10133839-10140227 Medicago truncatula
Medtr6g029390 5.0kb upstream 5.0kb upstream 5000 false chr6: 10135228-10140227 Medicago truncatula
Medtr6g029390 5.0kb downstream 5.0kb downstream 6389 true chr6: 10128839-10135227 Medicago truncatula
Medtr6g029390 5.0kb downstream 5.0kb downstream 5000 false chr6: 10128839-10133838 Medicago truncatula
Medtr6g029390 10.0kb upstream 10.0kb upstream 11389 true chr6: 10133839-10145227 Medicago truncatula
Medtr6g029390 10.0kb upstream 10.0kb upstream 10000 false chr6: 10135228-10145227 Medicago truncatula
Medtr6g029390 10.0kb downstream 10.0kb downstream 11389 true chr6: 10123839-10135227 Medicago truncatula
Medtr6g029390 10.0kb downstream 10.0kb downstream 10000 false chr6: 10123839-10133838 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301057 5265 Fabidae View MSA
124067801 5270 Rosid View MSA
123745806 5271 Pentapetalae View MSA
122791718 5272 Eudicot View MSA
122044288 5273 Angiosperm View MSA
121345647 5274 Embryophyte View MSA
123380250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.603     High High
cufflinks 6.861        
cufflinks 3.862       Low
cufflinks 8.165        
cufflinks 8.064        
cufflinks 36.759     High High
cufflinks 15.878     High  
cufflinks 4.633       Low
cufflinks 8.61        

0 Strain