Gene : Medtr6g007767 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11903//PTHR11903:SF14 - PROSTAGLANDIN G/H SYNTHASE Description:  pathogen-inducible alpha-dioxygenase
Genomic Order:  265 Name:  ? Medtr6g007767
Secondary Identifier:  ? PAC:31102859
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007767 0.5kb upstream 0.5kb upstream 6693 true chr6: 1935914-1942606 Medicago truncatula
Medtr6g007767 0.5kb upstream 0.5kb upstream 500 false chr6: 1935914-1936413 Medicago truncatula
Medtr6g007767 0.5kb downstream 0.5kb downstream 6693 true chr6: 1936414-1943106 Medicago truncatula
Medtr6g007767 0.5kb downstream 0.5kb downstream 500 false chr6: 1942607-1943106 Medicago truncatula
Medtr6g007767 1.0kb upstream 1.0kb upstream 7193 true chr6: 1935414-1942606 Medicago truncatula
Medtr6g007767 1.0kb upstream 1.0kb upstream 1000 false chr6: 1935414-1936413 Medicago truncatula
Medtr6g007767 1.0kb downstream 1.0kb downstream 7193 true chr6: 1936414-1943606 Medicago truncatula
Medtr6g007767 1.0kb downstream 1.0kb downstream 1000 false chr6: 1942607-1943606 Medicago truncatula
Medtr6g007767 2.0kb upstream 2.0kb upstream 8193 true chr6: 1934414-1942606 Medicago truncatula
Medtr6g007767 2.0kb upstream 2.0kb upstream 2000 false chr6: 1934414-1936413 Medicago truncatula
Medtr6g007767 2.0kb downstream 2.0kb downstream 8193 true chr6: 1936414-1944606 Medicago truncatula
Medtr6g007767 2.0kb downstream 2.0kb downstream 2000 false chr6: 1942607-1944606 Medicago truncatula
Medtr6g007767 5.0kb upstream 5.0kb upstream 11193 true chr6: 1931414-1942606 Medicago truncatula
Medtr6g007767 5.0kb upstream 5.0kb upstream 5000 false chr6: 1931414-1936413 Medicago truncatula
Medtr6g007767 5.0kb downstream 5.0kb downstream 11193 true chr6: 1936414-1947606 Medicago truncatula
Medtr6g007767 5.0kb downstream 5.0kb downstream 5000 false chr6: 1942607-1947606 Medicago truncatula
Medtr6g007767 10.0kb upstream 10.0kb upstream 16193 true chr6: 1926414-1942606 Medicago truncatula
Medtr6g007767 10.0kb upstream 10.0kb upstream 10000 false chr6: 1926414-1936413 Medicago truncatula
Medtr6g007767 10.0kb downstream 10.0kb downstream 16193 true chr6: 1936414-1952606 Medicago truncatula
Medtr6g007767 10.0kb downstream 10.0kb downstream 10000 false chr6: 1942607-1952606 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312257 5265 Fabidae View MSA
124072334 5270 Rosid View MSA
123745708 5271 Pentapetalae View MSA
122788092 5272 Eudicot View MSA
122049602 5273 Angiosperm View MSA
121344304 5274 Embryophyte View MSA
123380019 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.107        
cufflinks 0.004     Low Low
cufflinks 0.027     Low  
cufflinks 14.961     High  
cufflinks 0.007     Low Low
cufflinks 10.811     High  
cufflinks 28.005     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.712     High  

0 Strain