Gene : Medtr6g007770 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11903//PTHR11903:SF14 - PROSTAGLANDIN G/H SYNTHASE Description:  pathogen-inducible alpha-dioxygenase
Genomic Order:  266 Name:  ? Medtr6g007770
Secondary Identifier:  ? PAC:31103856
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007770 0.5kb upstream 0.5kb upstream 5100 true chr6: 1952181-1957280 Medicago truncatula
Medtr6g007770 0.5kb upstream 0.5kb upstream 500 false chr6: 1952181-1952680 Medicago truncatula
Medtr6g007770 0.5kb downstream 0.5kb downstream 5100 true chr6: 1952681-1957780 Medicago truncatula
Medtr6g007770 0.5kb downstream 0.5kb downstream 500 false chr6: 1957281-1957780 Medicago truncatula
Medtr6g007770 1.0kb upstream 1.0kb upstream 5600 true chr6: 1951681-1957280 Medicago truncatula
Medtr6g007770 1.0kb upstream 1.0kb upstream 1000 false chr6: 1951681-1952680 Medicago truncatula
Medtr6g007770 1.0kb downstream 1.0kb downstream 5600 true chr6: 1952681-1958280 Medicago truncatula
Medtr6g007770 1.0kb downstream 1.0kb downstream 1000 false chr6: 1957281-1958280 Medicago truncatula
Medtr6g007770 2.0kb upstream 2.0kb upstream 6600 true chr6: 1950681-1957280 Medicago truncatula
Medtr6g007770 2.0kb upstream 2.0kb upstream 2000 false chr6: 1950681-1952680 Medicago truncatula
Medtr6g007770 2.0kb downstream 2.0kb downstream 6600 true chr6: 1952681-1959280 Medicago truncatula
Medtr6g007770 2.0kb downstream 2.0kb downstream 2000 false chr6: 1957281-1959280 Medicago truncatula
Medtr6g007770 5.0kb upstream 5.0kb upstream 9600 true chr6: 1947681-1957280 Medicago truncatula
Medtr6g007770 5.0kb upstream 5.0kb upstream 5000 false chr6: 1947681-1952680 Medicago truncatula
Medtr6g007770 5.0kb downstream 5.0kb downstream 9600 true chr6: 1952681-1962280 Medicago truncatula
Medtr6g007770 5.0kb downstream 5.0kb downstream 5000 false chr6: 1957281-1962280 Medicago truncatula
Medtr6g007770 10.0kb upstream 10.0kb upstream 14600 true chr6: 1942681-1957280 Medicago truncatula
Medtr6g007770 10.0kb upstream 10.0kb upstream 10000 false chr6: 1942681-1952680 Medicago truncatula
Medtr6g007770 10.0kb downstream 10.0kb downstream 14600 true chr6: 1952681-1967280 Medicago truncatula
Medtr6g007770 10.0kb downstream 10.0kb downstream 10000 false chr6: 1957281-1967280 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658118 5273 Angiosperm View MSA
122289825 5265 Fabidae View MSA
124041209 5270 Rosid View MSA
123612177 5271 Pentapetalae View MSA
122646695 5272 Eudicot View MSA
120930129 5274 Embryophyte View MSA
122970661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 0.008     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.311       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.008     Low  

0 Strain