Gene : Medtr6g007647 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Description:  homeobox associated leucine zipper protein
Genomic Order:  237 Name:  ? Medtr6g007647
Secondary Identifier:  ? PAC:31103767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007647 0.5kb upstream 0.5kb upstream 3978 true chr6: 1730172-1734149 Medicago truncatula
Medtr6g007647 0.5kb upstream 0.5kb upstream 500 false chr6: 1730172-1730671 Medicago truncatula
Medtr6g007647 0.5kb downstream 0.5kb downstream 3978 true chr6: 1730672-1734649 Medicago truncatula
Medtr6g007647 0.5kb downstream 0.5kb downstream 500 false chr6: 1734150-1734649 Medicago truncatula
Medtr6g007647 1.0kb upstream 1.0kb upstream 4478 true chr6: 1729672-1734149 Medicago truncatula
Medtr6g007647 1.0kb upstream 1.0kb upstream 1000 false chr6: 1729672-1730671 Medicago truncatula
Medtr6g007647 1.0kb downstream 1.0kb downstream 4478 true chr6: 1730672-1735149 Medicago truncatula
Medtr6g007647 1.0kb downstream 1.0kb downstream 1000 false chr6: 1734150-1735149 Medicago truncatula
Medtr6g007647 2.0kb upstream 2.0kb upstream 5478 true chr6: 1728672-1734149 Medicago truncatula
Medtr6g007647 2.0kb upstream 2.0kb upstream 2000 false chr6: 1728672-1730671 Medicago truncatula
Medtr6g007647 2.0kb downstream 2.0kb downstream 5478 true chr6: 1730672-1736149 Medicago truncatula
Medtr6g007647 2.0kb downstream 2.0kb downstream 2000 false chr6: 1734150-1736149 Medicago truncatula
Medtr6g007647 5.0kb upstream 5.0kb upstream 8478 true chr6: 1725672-1734149 Medicago truncatula
Medtr6g007647 5.0kb upstream 5.0kb upstream 5000 false chr6: 1725672-1730671 Medicago truncatula
Medtr6g007647 5.0kb downstream 5.0kb downstream 8478 true chr6: 1730672-1739149 Medicago truncatula
Medtr6g007647 5.0kb downstream 5.0kb downstream 5000 false chr6: 1734150-1739149 Medicago truncatula
Medtr6g007647 10.0kb upstream 10.0kb upstream 13478 true chr6: 1720672-1734149 Medicago truncatula
Medtr6g007647 10.0kb upstream 10.0kb upstream 10000 false chr6: 1720672-1730671 Medicago truncatula
Medtr6g007647 10.0kb downstream 10.0kb downstream 13478 true chr6: 1730672-1744149 Medicago truncatula
Medtr6g007647 10.0kb downstream 10.0kb downstream 10000 false chr6: 1734150-1744149 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302072 5265 Fabidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.866       Low
cufflinks 8.361        
cufflinks 12.856     High  
cufflinks 10.878     High  
cufflinks 8.93        
cufflinks 11.701     High  
cufflinks 46.995     High High
cufflinks 9.313     High  
cufflinks 20.348     High  

0 Strain