Gene : Medtr6g012110 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  458 Name:  ? Medtr6g012110
Secondary Identifier:  ? PAC:31105359
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g012110 0.5kb upstream 0.5kb upstream 1727 true chr6: 3584433-3586159 Medicago truncatula
Medtr6g012110 0.5kb upstream 0.5kb upstream 500 false chr6: 3585660-3586159 Medicago truncatula
Medtr6g012110 0.5kb downstream 0.5kb downstream 1727 true chr6: 3583933-3585659 Medicago truncatula
Medtr6g012110 0.5kb downstream 0.5kb downstream 500 false chr6: 3583933-3584432 Medicago truncatula
Medtr6g012110 1.0kb upstream 1.0kb upstream 2227 true chr6: 3584433-3586659 Medicago truncatula
Medtr6g012110 1.0kb upstream 1.0kb upstream 1000 false chr6: 3585660-3586659 Medicago truncatula
Medtr6g012110 1.0kb downstream 1.0kb downstream 2227 true chr6: 3583433-3585659 Medicago truncatula
Medtr6g012110 1.0kb downstream 1.0kb downstream 1000 false chr6: 3583433-3584432 Medicago truncatula
Medtr6g012110 2.0kb upstream 2.0kb upstream 3227 true chr6: 3584433-3587659 Medicago truncatula
Medtr6g012110 2.0kb upstream 2.0kb upstream 2000 false chr6: 3585660-3587659 Medicago truncatula
Medtr6g012110 2.0kb downstream 2.0kb downstream 3227 true chr6: 3582433-3585659 Medicago truncatula
Medtr6g012110 2.0kb downstream 2.0kb downstream 2000 false chr6: 3582433-3584432 Medicago truncatula
Medtr6g012110 5.0kb upstream 5.0kb upstream 6227 true chr6: 3584433-3590659 Medicago truncatula
Medtr6g012110 5.0kb upstream 5.0kb upstream 5000 false chr6: 3585660-3590659 Medicago truncatula
Medtr6g012110 5.0kb downstream 5.0kb downstream 6227 true chr6: 3579433-3585659 Medicago truncatula
Medtr6g012110 5.0kb downstream 5.0kb downstream 5000 false chr6: 3579433-3584432 Medicago truncatula
Medtr6g012110 10.0kb upstream 10.0kb upstream 11227 true chr6: 3584433-3595659 Medicago truncatula
Medtr6g012110 10.0kb upstream 10.0kb upstream 10000 false chr6: 3585660-3595659 Medicago truncatula
Medtr6g012110 10.0kb downstream 10.0kb downstream 11227 true chr6: 3574433-3585659 Medicago truncatula
Medtr6g012110 10.0kb downstream 10.0kb downstream 10000 false chr6: 3574433-3584432 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289900 5265 Fabidae View MSA
124051137 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 551.524     High  
cufflinks 228.501     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 835.551     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.109       Low
cufflinks 529.719     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain