Gene : Medtr6g011450 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Description:  PCF11P-related protein
Genomic Order:  428 Name:  ? Medtr6g011450
Secondary Identifier:  ? PAC:31101576
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g011450 0.5kb upstream 0.5kb upstream 6849 true chr6: 3245956-3252804 Medicago truncatula
Medtr6g011450 0.5kb upstream 0.5kb upstream 500 false chr6: 3245956-3246455 Medicago truncatula
Medtr6g011450 0.5kb downstream 0.5kb downstream 6849 true chr6: 3246456-3253304 Medicago truncatula
Medtr6g011450 0.5kb downstream 0.5kb downstream 500 false chr6: 3252805-3253304 Medicago truncatula
Medtr6g011450 1.0kb upstream 1.0kb upstream 7349 true chr6: 3245456-3252804 Medicago truncatula
Medtr6g011450 1.0kb upstream 1.0kb upstream 1000 false chr6: 3245456-3246455 Medicago truncatula
Medtr6g011450 1.0kb downstream 1.0kb downstream 7349 true chr6: 3246456-3253804 Medicago truncatula
Medtr6g011450 1.0kb downstream 1.0kb downstream 1000 false chr6: 3252805-3253804 Medicago truncatula
Medtr6g011450 2.0kb upstream 2.0kb upstream 8349 true chr6: 3244456-3252804 Medicago truncatula
Medtr6g011450 2.0kb upstream 2.0kb upstream 2000 false chr6: 3244456-3246455 Medicago truncatula
Medtr6g011450 2.0kb downstream 2.0kb downstream 8349 true chr6: 3246456-3254804 Medicago truncatula
Medtr6g011450 2.0kb downstream 2.0kb downstream 2000 false chr6: 3252805-3254804 Medicago truncatula
Medtr6g011450 5.0kb upstream 5.0kb upstream 11349 true chr6: 3241456-3252804 Medicago truncatula
Medtr6g011450 5.0kb upstream 5.0kb upstream 5000 false chr6: 3241456-3246455 Medicago truncatula
Medtr6g011450 5.0kb downstream 5.0kb downstream 11349 true chr6: 3246456-3257804 Medicago truncatula
Medtr6g011450 5.0kb downstream 5.0kb downstream 5000 false chr6: 3252805-3257804 Medicago truncatula
Medtr6g011450 10.0kb upstream 10.0kb upstream 16349 true chr6: 3236456-3252804 Medicago truncatula
Medtr6g011450 10.0kb upstream 10.0kb upstream 10000 false chr6: 3236456-3246455 Medicago truncatula
Medtr6g011450 10.0kb downstream 10.0kb downstream 16349 true chr6: 3246456-3262804 Medicago truncatula
Medtr6g011450 10.0kb downstream 10.0kb downstream 10000 false chr6: 3252805-3262804 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307813 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.107       High
cufflinks 2.243        
cufflinks 2.288        
cufflinks 1.792        
cufflinks 2.569        
cufflinks 1.511       Low
cufflinks 1.619       Low
cufflinks 2.131        
cufflinks 2.201        

0 Strain