Gene : Medtr6g011390 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11743//PTHR11743:SF31 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL Description:  porin/voltage-dependent anion-selective channel protein
Genomic Order:  423 Name:  ? Medtr6g011390
Secondary Identifier:  ? PAC:31101552
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g011390 0.5kb upstream 0.5kb upstream 4997 true chr6: 3207208-3212204 Medicago truncatula
Medtr6g011390 0.5kb upstream 0.5kb upstream 500 false chr6: 3211705-3212204 Medicago truncatula
Medtr6g011390 0.5kb downstream 0.5kb downstream 4997 true chr6: 3206708-3211704 Medicago truncatula
Medtr6g011390 0.5kb downstream 0.5kb downstream 500 false chr6: 3206708-3207207 Medicago truncatula
Medtr6g011390 1.0kb upstream 1.0kb upstream 5497 true chr6: 3207208-3212704 Medicago truncatula
Medtr6g011390 1.0kb upstream 1.0kb upstream 1000 false chr6: 3211705-3212704 Medicago truncatula
Medtr6g011390 1.0kb downstream 1.0kb downstream 5497 true chr6: 3206208-3211704 Medicago truncatula
Medtr6g011390 1.0kb downstream 1.0kb downstream 1000 false chr6: 3206208-3207207 Medicago truncatula
Medtr6g011390 2.0kb upstream 2.0kb upstream 6497 true chr6: 3207208-3213704 Medicago truncatula
Medtr6g011390 2.0kb upstream 2.0kb upstream 2000 false chr6: 3211705-3213704 Medicago truncatula
Medtr6g011390 2.0kb downstream 2.0kb downstream 6497 true chr6: 3205208-3211704 Medicago truncatula
Medtr6g011390 2.0kb downstream 2.0kb downstream 2000 false chr6: 3205208-3207207 Medicago truncatula
Medtr6g011390 5.0kb upstream 5.0kb upstream 9497 true chr6: 3207208-3216704 Medicago truncatula
Medtr6g011390 5.0kb upstream 5.0kb upstream 5000 false chr6: 3211705-3216704 Medicago truncatula
Medtr6g011390 5.0kb downstream 5.0kb downstream 9497 true chr6: 3202208-3211704 Medicago truncatula
Medtr6g011390 5.0kb downstream 5.0kb downstream 5000 false chr6: 3202208-3207207 Medicago truncatula
Medtr6g011390 10.0kb upstream 10.0kb upstream 14497 true chr6: 3207208-3221704 Medicago truncatula
Medtr6g011390 10.0kb upstream 10.0kb upstream 10000 false chr6: 3211705-3221704 Medicago truncatula
Medtr6g011390 10.0kb downstream 10.0kb downstream 14497 true chr6: 3197208-3211704 Medicago truncatula
Medtr6g011390 10.0kb downstream 10.0kb downstream 10000 false chr6: 3197208-3207207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314500 5265 Fabidae View MSA
124071334 5270 Rosid View MSA
123743452 5271 Pentapetalae View MSA
122795321 5272 Eudicot View MSA
122042398 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.905     High  
cufflinks 14.561     High  
cufflinks 11.31     High  
cufflinks 24.677     High  
cufflinks 20.255     High  
cufflinks 8.718       Low
cufflinks 22.46     High  
cufflinks 12.296     High  
cufflinks 35.724     High High

0 Strain