Gene : Medtr6g012520 M. truncatula Mt4.0v1
Defline:  (1 of 40) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Description:  expansin A10
Genomic Order:  482 Name:  ? Medtr6g012520
Secondary Identifier:  ? PAC:31103065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g012520 0.5kb upstream 0.5kb upstream 2368 true chr6: 3813982-3816349 Medicago truncatula
Medtr6g012520 0.5kb upstream 0.5kb upstream 500 false chr6: 3815850-3816349 Medicago truncatula
Medtr6g012520 0.5kb downstream 0.5kb downstream 2368 true chr6: 3813482-3815849 Medicago truncatula
Medtr6g012520 0.5kb downstream 0.5kb downstream 500 false chr6: 3813482-3813981 Medicago truncatula
Medtr6g012520 1.0kb upstream 1.0kb upstream 2868 true chr6: 3813982-3816849 Medicago truncatula
Medtr6g012520 1.0kb upstream 1.0kb upstream 1000 false chr6: 3815850-3816849 Medicago truncatula
Medtr6g012520 1.0kb downstream 1.0kb downstream 2868 true chr6: 3812982-3815849 Medicago truncatula
Medtr6g012520 1.0kb downstream 1.0kb downstream 1000 false chr6: 3812982-3813981 Medicago truncatula
Medtr6g012520 2.0kb upstream 2.0kb upstream 3868 true chr6: 3813982-3817849 Medicago truncatula
Medtr6g012520 2.0kb upstream 2.0kb upstream 2000 false chr6: 3815850-3817849 Medicago truncatula
Medtr6g012520 2.0kb downstream 2.0kb downstream 3868 true chr6: 3811982-3815849 Medicago truncatula
Medtr6g012520 2.0kb downstream 2.0kb downstream 2000 false chr6: 3811982-3813981 Medicago truncatula
Medtr6g012520 5.0kb upstream 5.0kb upstream 6868 true chr6: 3813982-3820849 Medicago truncatula
Medtr6g012520 5.0kb upstream 5.0kb upstream 5000 false chr6: 3815850-3820849 Medicago truncatula
Medtr6g012520 5.0kb downstream 5.0kb downstream 6868 true chr6: 3808982-3815849 Medicago truncatula
Medtr6g012520 5.0kb downstream 5.0kb downstream 5000 false chr6: 3808982-3813981 Medicago truncatula
Medtr6g012520 10.0kb upstream 10.0kb upstream 11868 true chr6: 3813982-3825849 Medicago truncatula
Medtr6g012520 10.0kb upstream 10.0kb upstream 10000 false chr6: 3815850-3825849 Medicago truncatula
Medtr6g012520 10.0kb downstream 10.0kb downstream 11868 true chr6: 3803982-3815849 Medicago truncatula
Medtr6g012520 10.0kb downstream 10.0kb downstream 10000 false chr6: 3803982-3813981 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310156 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.176        
cufflinks 4.916        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.812     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.648        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain