Gene : Medtr6g013820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13169:SF4 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Description:  membrane-anchored ubiquitin-fold protein 4 precursor
Genomic Order:  568 Name:  ? Medtr6g013820
Secondary Identifier:  ? PAC:31103801
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g013820 0.5kb upstream 0.5kb upstream 2977 true chr6: 4419227-4422203 Medicago truncatula
Medtr6g013820 0.5kb upstream 0.5kb upstream 500 false chr6: 4421704-4422203 Medicago truncatula
Medtr6g013820 0.5kb downstream 0.5kb downstream 2977 true chr6: 4418727-4421703 Medicago truncatula
Medtr6g013820 0.5kb downstream 0.5kb downstream 500 false chr6: 4418727-4419226 Medicago truncatula
Medtr6g013820 1.0kb upstream 1.0kb upstream 3477 true chr6: 4419227-4422703 Medicago truncatula
Medtr6g013820 1.0kb upstream 1.0kb upstream 1000 false chr6: 4421704-4422703 Medicago truncatula
Medtr6g013820 1.0kb downstream 1.0kb downstream 3477 true chr6: 4418227-4421703 Medicago truncatula
Medtr6g013820 1.0kb downstream 1.0kb downstream 1000 false chr6: 4418227-4419226 Medicago truncatula
Medtr6g013820 2.0kb upstream 2.0kb upstream 4477 true chr6: 4419227-4423703 Medicago truncatula
Medtr6g013820 2.0kb upstream 2.0kb upstream 2000 false chr6: 4421704-4423703 Medicago truncatula
Medtr6g013820 2.0kb downstream 2.0kb downstream 4477 true chr6: 4417227-4421703 Medicago truncatula
Medtr6g013820 2.0kb downstream 2.0kb downstream 2000 false chr6: 4417227-4419226 Medicago truncatula
Medtr6g013820 5.0kb upstream 5.0kb upstream 7477 true chr6: 4419227-4426703 Medicago truncatula
Medtr6g013820 5.0kb upstream 5.0kb upstream 5000 false chr6: 4421704-4426703 Medicago truncatula
Medtr6g013820 5.0kb downstream 5.0kb downstream 7477 true chr6: 4414227-4421703 Medicago truncatula
Medtr6g013820 5.0kb downstream 5.0kb downstream 5000 false chr6: 4414227-4419226 Medicago truncatula
Medtr6g013820 10.0kb upstream 10.0kb upstream 12477 true chr6: 4419227-4431703 Medicago truncatula
Medtr6g013820 10.0kb upstream 10.0kb upstream 10000 false chr6: 4421704-4431703 Medicago truncatula
Medtr6g013820 10.0kb downstream 10.0kb downstream 12477 true chr6: 4409227-4421703 Medicago truncatula
Medtr6g013820 10.0kb downstream 10.0kb downstream 10000 false chr6: 4409227-4419226 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314619 5265 Fabidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.964       Low
cufflinks 6.526        
cufflinks 8.022       High
cufflinks 3.55        
cufflinks 7.365        
cufflinks 3.265        
cufflinks 5.892        
cufflinks 6.548        
cufflinks 4.601        

0 Strain