Gene : Medtr6g015390 M. truncatula Mt4.0v1
Defline:  (1 of 2) K18635 - protein SPIRAL1 and related proteins (SPR1) Description:  SPIRAL protein, putative
Genomic Order:  661 Name:  ? Medtr6g015390
Secondary Identifier:  ? PAC:31105667
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g015390 0.5kb upstream 0.5kb upstream 4211 true chr6: 5047044-5051254 Medicago truncatula
Medtr6g015390 0.5kb upstream 0.5kb upstream 500 false chr6: 5047044-5047543 Medicago truncatula
Medtr6g015390 0.5kb downstream 0.5kb downstream 4211 true chr6: 5047544-5051754 Medicago truncatula
Medtr6g015390 0.5kb downstream 0.5kb downstream 500 false chr6: 5051255-5051754 Medicago truncatula
Medtr6g015390 1.0kb upstream 1.0kb upstream 4711 true chr6: 5046544-5051254 Medicago truncatula
Medtr6g015390 1.0kb upstream 1.0kb upstream 1000 false chr6: 5046544-5047543 Medicago truncatula
Medtr6g015390 1.0kb downstream 1.0kb downstream 4711 true chr6: 5047544-5052254 Medicago truncatula
Medtr6g015390 1.0kb downstream 1.0kb downstream 1000 false chr6: 5051255-5052254 Medicago truncatula
Medtr6g015390 2.0kb upstream 2.0kb upstream 5711 true chr6: 5045544-5051254 Medicago truncatula
Medtr6g015390 2.0kb upstream 2.0kb upstream 2000 false chr6: 5045544-5047543 Medicago truncatula
Medtr6g015390 2.0kb downstream 2.0kb downstream 5711 true chr6: 5047544-5053254 Medicago truncatula
Medtr6g015390 2.0kb downstream 2.0kb downstream 2000 false chr6: 5051255-5053254 Medicago truncatula
Medtr6g015390 5.0kb upstream 5.0kb upstream 8711 true chr6: 5042544-5051254 Medicago truncatula
Medtr6g015390 5.0kb upstream 5.0kb upstream 5000 false chr6: 5042544-5047543 Medicago truncatula
Medtr6g015390 5.0kb downstream 5.0kb downstream 8711 true chr6: 5047544-5056254 Medicago truncatula
Medtr6g015390 5.0kb downstream 5.0kb downstream 5000 false chr6: 5051255-5056254 Medicago truncatula
Medtr6g015390 10.0kb upstream 10.0kb upstream 13711 true chr6: 5037544-5051254 Medicago truncatula
Medtr6g015390 10.0kb upstream 10.0kb upstream 10000 false chr6: 5037544-5047543 Medicago truncatula
Medtr6g015390 10.0kb downstream 10.0kb downstream 13711 true chr6: 5047544-5061254 Medicago truncatula
Medtr6g015390 10.0kb downstream 10.0kb downstream 10000 false chr6: 5051255-5061254 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314267 5265 Fabidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.862       Low
cufflinks 13.484     High  
cufflinks 17.234     High  
cufflinks 22.95     High High
cufflinks 14.372     High  
cufflinks 12.751     High  
cufflinks 6.25        
cufflinks 12.154     High  
cufflinks 13.415     High  

0 Strain