Gene : Medtr6g015020 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Description:  biotin carboxyl carrier acetyl-CoA carboxylase
Genomic Order:  628 Name:  ? Medtr6g015020
Secondary Identifier:  ? PAC:31101550
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1264 Medicago truncatula pathologic  
Mtruncatula PWY-4381 Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-7388 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g015020 0.5kb upstream 0.5kb upstream 4330 true chr6: 4862845-4867174 Medicago truncatula
Medtr6g015020 0.5kb upstream 0.5kb upstream 500 false chr6: 4862845-4863344 Medicago truncatula
Medtr6g015020 0.5kb downstream 0.5kb downstream 4330 true chr6: 4863345-4867674 Medicago truncatula
Medtr6g015020 0.5kb downstream 0.5kb downstream 500 false chr6: 4867175-4867674 Medicago truncatula
Medtr6g015020 1.0kb upstream 1.0kb upstream 4830 true chr6: 4862345-4867174 Medicago truncatula
Medtr6g015020 1.0kb upstream 1.0kb upstream 1000 false chr6: 4862345-4863344 Medicago truncatula
Medtr6g015020 1.0kb downstream 1.0kb downstream 4830 true chr6: 4863345-4868174 Medicago truncatula
Medtr6g015020 1.0kb downstream 1.0kb downstream 1000 false chr6: 4867175-4868174 Medicago truncatula
Medtr6g015020 2.0kb upstream 2.0kb upstream 5830 true chr6: 4861345-4867174 Medicago truncatula
Medtr6g015020 2.0kb upstream 2.0kb upstream 2000 false chr6: 4861345-4863344 Medicago truncatula
Medtr6g015020 2.0kb downstream 2.0kb downstream 5830 true chr6: 4863345-4869174 Medicago truncatula
Medtr6g015020 2.0kb downstream 2.0kb downstream 2000 false chr6: 4867175-4869174 Medicago truncatula
Medtr6g015020 5.0kb upstream 5.0kb upstream 8830 true chr6: 4858345-4867174 Medicago truncatula
Medtr6g015020 5.0kb upstream 5.0kb upstream 5000 false chr6: 4858345-4863344 Medicago truncatula
Medtr6g015020 5.0kb downstream 5.0kb downstream 8830 true chr6: 4863345-4872174 Medicago truncatula
Medtr6g015020 5.0kb downstream 5.0kb downstream 5000 false chr6: 4867175-4872174 Medicago truncatula
Medtr6g015020 10.0kb upstream 10.0kb upstream 13830 true chr6: 4853345-4867174 Medicago truncatula
Medtr6g015020 10.0kb upstream 10.0kb upstream 10000 false chr6: 4853345-4863344 Medicago truncatula
Medtr6g015020 10.0kb downstream 10.0kb downstream 13830 true chr6: 4863345-4877174 Medicago truncatula
Medtr6g015020 10.0kb downstream 10.0kb downstream 10000 false chr6: 4867175-4877174 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279       Low
cufflinks 2.929        
cufflinks 3.131        
cufflinks 1.456        
cufflinks 4.442        
cufflinks 0.271       Low
cufflinks 2.411        
cufflinks 2.994        
cufflinks 5.603       High

0 Strain