Gene : Medtr6g015880 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Description:  COBRA-like protein 2 precursor
Genomic Order:  722 Name:  ? Medtr6g015880
Secondary Identifier:  ? PAC:31104022
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g015880 0.5kb upstream 0.5kb upstream 3658 true chr6: 5552510-5556167 Medicago truncatula
Medtr6g015880 0.5kb upstream 0.5kb upstream 500 false chr6: 5555668-5556167 Medicago truncatula
Medtr6g015880 0.5kb downstream 0.5kb downstream 3658 true chr6: 5552010-5555667 Medicago truncatula
Medtr6g015880 0.5kb downstream 0.5kb downstream 500 false chr6: 5552010-5552509 Medicago truncatula
Medtr6g015880 1.0kb upstream 1.0kb upstream 4158 true chr6: 5552510-5556667 Medicago truncatula
Medtr6g015880 1.0kb upstream 1.0kb upstream 1000 false chr6: 5555668-5556667 Medicago truncatula
Medtr6g015880 1.0kb downstream 1.0kb downstream 4158 true chr6: 5551510-5555667 Medicago truncatula
Medtr6g015880 1.0kb downstream 1.0kb downstream 1000 false chr6: 5551510-5552509 Medicago truncatula
Medtr6g015880 2.0kb upstream 2.0kb upstream 5158 true chr6: 5552510-5557667 Medicago truncatula
Medtr6g015880 2.0kb upstream 2.0kb upstream 2000 false chr6: 5555668-5557667 Medicago truncatula
Medtr6g015880 2.0kb downstream 2.0kb downstream 5158 true chr6: 5550510-5555667 Medicago truncatula
Medtr6g015880 2.0kb downstream 2.0kb downstream 2000 false chr6: 5550510-5552509 Medicago truncatula
Medtr6g015880 5.0kb upstream 5.0kb upstream 8158 true chr6: 5552510-5560667 Medicago truncatula
Medtr6g015880 5.0kb upstream 5.0kb upstream 5000 false chr6: 5555668-5560667 Medicago truncatula
Medtr6g015880 5.0kb downstream 5.0kb downstream 8158 true chr6: 5547510-5555667 Medicago truncatula
Medtr6g015880 5.0kb downstream 5.0kb downstream 5000 false chr6: 5547510-5552509 Medicago truncatula
Medtr6g015880 10.0kb upstream 10.0kb upstream 13158 true chr6: 5552510-5565667 Medicago truncatula
Medtr6g015880 10.0kb upstream 10.0kb upstream 10000 false chr6: 5555668-5565667 Medicago truncatula
Medtr6g015880 10.0kb downstream 10.0kb downstream 13158 true chr6: 5542510-5555667 Medicago truncatula
Medtr6g015880 10.0kb downstream 10.0kb downstream 10000 false chr6: 5542510-5552509 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311331 5265 Fabidae View MSA
124068379 5270 Rosid View MSA
123742644 5271 Pentapetalae View MSA
122793742 5272 Eudicot View MSA
122043541 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low Low
cufflinks 1.007        
cufflinks 0.681        
cufflinks 0.272        
cufflinks 2.203       High
cufflinks 0.201        
cufflinks 0.434        
cufflinks 0.824        
cufflinks 0.812        

0 Strain