Gene : Medtr6g016570 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR34191:SF2 - STRESS-INDUCED PROTEIN KIN1-RELATED Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  815 Name:  ? Medtr6g016570
Secondary Identifier:  ? PAC:31103264
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016570 0.5kb upstream 0.5kb upstream 1736 true chr6: 6279410-6281145 Medicago truncatula
Medtr6g016570 0.5kb upstream 0.5kb upstream 500 false chr6: 6280646-6281145 Medicago truncatula
Medtr6g016570 0.5kb downstream 0.5kb downstream 1736 true chr6: 6278910-6280645 Medicago truncatula
Medtr6g016570 0.5kb downstream 0.5kb downstream 500 false chr6: 6278910-6279409 Medicago truncatula
Medtr6g016570 1.0kb upstream 1.0kb upstream 2236 true chr6: 6279410-6281645 Medicago truncatula
Medtr6g016570 1.0kb upstream 1.0kb upstream 1000 false chr6: 6280646-6281645 Medicago truncatula
Medtr6g016570 1.0kb downstream 1.0kb downstream 2236 true chr6: 6278410-6280645 Medicago truncatula
Medtr6g016570 1.0kb downstream 1.0kb downstream 1000 false chr6: 6278410-6279409 Medicago truncatula
Medtr6g016570 2.0kb upstream 2.0kb upstream 3236 true chr6: 6279410-6282645 Medicago truncatula
Medtr6g016570 2.0kb upstream 2.0kb upstream 2000 false chr6: 6280646-6282645 Medicago truncatula
Medtr6g016570 2.0kb downstream 2.0kb downstream 3236 true chr6: 6277410-6280645 Medicago truncatula
Medtr6g016570 2.0kb downstream 2.0kb downstream 2000 false chr6: 6277410-6279409 Medicago truncatula
Medtr6g016570 5.0kb upstream 5.0kb upstream 6236 true chr6: 6279410-6285645 Medicago truncatula
Medtr6g016570 5.0kb upstream 5.0kb upstream 5000 false chr6: 6280646-6285645 Medicago truncatula
Medtr6g016570 5.0kb downstream 5.0kb downstream 6236 true chr6: 6274410-6280645 Medicago truncatula
Medtr6g016570 5.0kb downstream 5.0kb downstream 5000 false chr6: 6274410-6279409 Medicago truncatula
Medtr6g016570 10.0kb upstream 10.0kb upstream 11236 true chr6: 6279410-6290645 Medicago truncatula
Medtr6g016570 10.0kb upstream 10.0kb upstream 10000 false chr6: 6280646-6290645 Medicago truncatula
Medtr6g016570 10.0kb downstream 10.0kb downstream 11236 true chr6: 6269410-6280645 Medicago truncatula
Medtr6g016570 10.0kb downstream 10.0kb downstream 10000 false chr6: 6269410-6279409 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  

0 Strain