Gene : Medtr6g016540 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR34191:SF2 - STRESS-INDUCED PROTEIN KIN1-RELATED Description:  pollen coat-like protein
Genomic Order:  811 Name:  ? Medtr6g016540
Secondary Identifier:  ? PAC:31101535
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016540 0.5kb upstream 0.5kb upstream 1160 true chr6: 6258840-6259999 Medicago truncatula
Medtr6g016540 0.5kb upstream 0.5kb upstream 500 false chr6: 6259500-6259999 Medicago truncatula
Medtr6g016540 0.5kb downstream 0.5kb downstream 1160 true chr6: 6258340-6259499 Medicago truncatula
Medtr6g016540 0.5kb downstream 0.5kb downstream 500 false chr6: 6258340-6258839 Medicago truncatula
Medtr6g016540 1.0kb upstream 1.0kb upstream 1660 true chr6: 6258840-6260499 Medicago truncatula
Medtr6g016540 1.0kb upstream 1.0kb upstream 1000 false chr6: 6259500-6260499 Medicago truncatula
Medtr6g016540 1.0kb downstream 1.0kb downstream 1660 true chr6: 6257840-6259499 Medicago truncatula
Medtr6g016540 1.0kb downstream 1.0kb downstream 1000 false chr6: 6257840-6258839 Medicago truncatula
Medtr6g016540 2.0kb upstream 2.0kb upstream 2660 true chr6: 6258840-6261499 Medicago truncatula
Medtr6g016540 2.0kb upstream 2.0kb upstream 2000 false chr6: 6259500-6261499 Medicago truncatula
Medtr6g016540 2.0kb downstream 2.0kb downstream 2660 true chr6: 6256840-6259499 Medicago truncatula
Medtr6g016540 2.0kb downstream 2.0kb downstream 2000 false chr6: 6256840-6258839 Medicago truncatula
Medtr6g016540 5.0kb upstream 5.0kb upstream 5660 true chr6: 6258840-6264499 Medicago truncatula
Medtr6g016540 5.0kb upstream 5.0kb upstream 5000 false chr6: 6259500-6264499 Medicago truncatula
Medtr6g016540 5.0kb downstream 5.0kb downstream 5660 true chr6: 6253840-6259499 Medicago truncatula
Medtr6g016540 5.0kb downstream 5.0kb downstream 5000 false chr6: 6253840-6258839 Medicago truncatula
Medtr6g016540 10.0kb upstream 10.0kb upstream 10660 true chr6: 6258840-6269499 Medicago truncatula
Medtr6g016540 10.0kb upstream 10.0kb upstream 10000 false chr6: 6259500-6269499 Medicago truncatula
Medtr6g016540 10.0kb downstream 10.0kb downstream 10660 true chr6: 6248840-6259499 Medicago truncatula
Medtr6g016540 10.0kb downstream 10.0kb downstream 10000 false chr6: 6248840-6258839 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain