Gene : Medtr6g016550 M. truncatula Mt4.0v1
Defline:  (1 of 6) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  813 Name:  ? Medtr6g016550
Secondary Identifier:  ? PAC:31105019
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016550 0.5kb upstream 0.5kb upstream 1344 true chr6: 6263187-6264530 Medicago truncatula
Medtr6g016550 0.5kb upstream 0.5kb upstream 500 false chr6: 6264031-6264530 Medicago truncatula
Medtr6g016550 0.5kb downstream 0.5kb downstream 1344 true chr6: 6262687-6264030 Medicago truncatula
Medtr6g016550 0.5kb downstream 0.5kb downstream 500 false chr6: 6262687-6263186 Medicago truncatula
Medtr6g016550 1.0kb upstream 1.0kb upstream 1844 true chr6: 6263187-6265030 Medicago truncatula
Medtr6g016550 1.0kb upstream 1.0kb upstream 1000 false chr6: 6264031-6265030 Medicago truncatula
Medtr6g016550 1.0kb downstream 1.0kb downstream 1844 true chr6: 6262187-6264030 Medicago truncatula
Medtr6g016550 1.0kb downstream 1.0kb downstream 1000 false chr6: 6262187-6263186 Medicago truncatula
Medtr6g016550 2.0kb upstream 2.0kb upstream 2844 true chr6: 6263187-6266030 Medicago truncatula
Medtr6g016550 2.0kb upstream 2.0kb upstream 2000 false chr6: 6264031-6266030 Medicago truncatula
Medtr6g016550 2.0kb downstream 2.0kb downstream 2844 true chr6: 6261187-6264030 Medicago truncatula
Medtr6g016550 2.0kb downstream 2.0kb downstream 2000 false chr6: 6261187-6263186 Medicago truncatula
Medtr6g016550 5.0kb upstream 5.0kb upstream 5844 true chr6: 6263187-6269030 Medicago truncatula
Medtr6g016550 5.0kb upstream 5.0kb upstream 5000 false chr6: 6264031-6269030 Medicago truncatula
Medtr6g016550 5.0kb downstream 5.0kb downstream 5844 true chr6: 6258187-6264030 Medicago truncatula
Medtr6g016550 5.0kb downstream 5.0kb downstream 5000 false chr6: 6258187-6263186 Medicago truncatula
Medtr6g016550 10.0kb upstream 10.0kb upstream 10844 true chr6: 6263187-6274030 Medicago truncatula
Medtr6g016550 10.0kb upstream 10.0kb upstream 10000 false chr6: 6264031-6274030 Medicago truncatula
Medtr6g016550 10.0kb downstream 10.0kb downstream 10844 true chr6: 6253187-6264030 Medicago truncatula
Medtr6g016550 10.0kb downstream 10.0kb downstream 10000 false chr6: 6253187-6263186 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain