Gene : Medtr6g016480 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Description:  transmembrane protein, putative
Genomic Order:  804 Name:  ? Medtr6g016480
Secondary Identifier:  ? PAC:31103899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016480 0.5kb upstream 0.5kb upstream 1352 true chr6: 6190971-6192322 Medicago truncatula
Medtr6g016480 0.5kb upstream 0.5kb upstream 500 false chr6: 6190971-6191470 Medicago truncatula
Medtr6g016480 0.5kb downstream 0.5kb downstream 1352 true chr6: 6191471-6192822 Medicago truncatula
Medtr6g016480 0.5kb downstream 0.5kb downstream 500 false chr6: 6192323-6192822 Medicago truncatula
Medtr6g016480 1.0kb upstream 1.0kb upstream 1852 true chr6: 6190471-6192322 Medicago truncatula
Medtr6g016480 1.0kb upstream 1.0kb upstream 1000 false chr6: 6190471-6191470 Medicago truncatula
Medtr6g016480 1.0kb downstream 1.0kb downstream 1852 true chr6: 6191471-6193322 Medicago truncatula
Medtr6g016480 1.0kb downstream 1.0kb downstream 1000 false chr6: 6192323-6193322 Medicago truncatula
Medtr6g016480 2.0kb upstream 2.0kb upstream 2852 true chr6: 6189471-6192322 Medicago truncatula
Medtr6g016480 2.0kb upstream 2.0kb upstream 2000 false chr6: 6189471-6191470 Medicago truncatula
Medtr6g016480 2.0kb downstream 2.0kb downstream 2852 true chr6: 6191471-6194322 Medicago truncatula
Medtr6g016480 2.0kb downstream 2.0kb downstream 2000 false chr6: 6192323-6194322 Medicago truncatula
Medtr6g016480 5.0kb upstream 5.0kb upstream 5852 true chr6: 6186471-6192322 Medicago truncatula
Medtr6g016480 5.0kb upstream 5.0kb upstream 5000 false chr6: 6186471-6191470 Medicago truncatula
Medtr6g016480 5.0kb downstream 5.0kb downstream 5852 true chr6: 6191471-6197322 Medicago truncatula
Medtr6g016480 5.0kb downstream 5.0kb downstream 5000 false chr6: 6192323-6197322 Medicago truncatula
Medtr6g016480 10.0kb upstream 10.0kb upstream 10852 true chr6: 6181471-6192322 Medicago truncatula
Medtr6g016480 10.0kb upstream 10.0kb upstream 10000 false chr6: 6181471-6191470 Medicago truncatula
Medtr6g016480 10.0kb downstream 10.0kb downstream 10852 true chr6: 6191471-6202322 Medicago truncatula
Medtr6g016480 10.0kb downstream 10.0kb downstream 10000 false chr6: 6192323-6202322 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.564       High
cufflinks 0.839        
cufflinks 0.926        
cufflinks 0.715        
cufflinks 0.561       Low
cufflinks 0.977        
cufflinks 1.689       High
cufflinks 1.171        
cufflinks 1.158        

0 Strain