Gene : Medtr5g459450 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Description:  phosphatidylinositol-4-phosphate 5-kinase family protein
Genomic Order:  3178 Name:  ? Medtr5g459450
Secondary Identifier:  ? PAC:31089343
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g459450 0.5kb upstream 0.5kb upstream 5078 true chr5: 24522325-24527402 Medicago truncatula
Medtr5g459450 0.5kb upstream 0.5kb upstream 500 false chr5: 24522325-24522824 Medicago truncatula
Medtr5g459450 0.5kb downstream 0.5kb downstream 5078 true chr5: 24522825-24527902 Medicago truncatula
Medtr5g459450 0.5kb downstream 0.5kb downstream 500 false chr5: 24527403-24527902 Medicago truncatula
Medtr5g459450 1.0kb upstream 1.0kb upstream 5578 true chr5: 24521825-24527402 Medicago truncatula
Medtr5g459450 1.0kb upstream 1.0kb upstream 1000 false chr5: 24521825-24522824 Medicago truncatula
Medtr5g459450 1.0kb downstream 1.0kb downstream 5578 true chr5: 24522825-24528402 Medicago truncatula
Medtr5g459450 1.0kb downstream 1.0kb downstream 1000 false chr5: 24527403-24528402 Medicago truncatula
Medtr5g459450 2.0kb upstream 2.0kb upstream 6578 true chr5: 24520825-24527402 Medicago truncatula
Medtr5g459450 2.0kb upstream 2.0kb upstream 2000 false chr5: 24520825-24522824 Medicago truncatula
Medtr5g459450 2.0kb downstream 2.0kb downstream 6578 true chr5: 24522825-24529402 Medicago truncatula
Medtr5g459450 2.0kb downstream 2.0kb downstream 2000 false chr5: 24527403-24529402 Medicago truncatula
Medtr5g459450 5.0kb upstream 5.0kb upstream 9578 true chr5: 24517825-24527402 Medicago truncatula
Medtr5g459450 5.0kb upstream 5.0kb upstream 5000 false chr5: 24517825-24522824 Medicago truncatula
Medtr5g459450 5.0kb downstream 5.0kb downstream 9578 true chr5: 24522825-24532402 Medicago truncatula
Medtr5g459450 5.0kb downstream 5.0kb downstream 5000 false chr5: 24527403-24532402 Medicago truncatula
Medtr5g459450 10.0kb upstream 10.0kb upstream 14578 true chr5: 24512825-24527402 Medicago truncatula
Medtr5g459450 10.0kb upstream 10.0kb upstream 10000 false chr5: 24512825-24522824 Medicago truncatula
Medtr5g459450 10.0kb downstream 10.0kb downstream 14578 true chr5: 24522825-24537402 Medicago truncatula
Medtr5g459450 10.0kb downstream 10.0kb downstream 10000 false chr5: 24527403-24537402 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311925 5265 Fabidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.111     High High
cufflinks 4.635        
cufflinks 7.33        
cufflinks 0.987       Low
cufflinks 7.084        
cufflinks 1.098       Low
cufflinks 3.912        
cufflinks 4.682        
cufflinks 3.389        

0 Strain