Gene : Medtr5g099290 M. truncatula Mt4.0v1

Defline:  (1 of 1) PTHR11689:SF14 - CHLORIDE CHANNEL PROTEIN 2 Description:  ClC chloride channel family protein
Genomic Order:  5825 Name:  ? Medtr5g099290
Secondary Identifier:  ? PAC:31090899

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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g099290 0.5kb upstream 0.5kb upstream 6566 true chr5: 43532058-43538623 Medicago truncatula
Medtr5g099290 0.5kb upstream 0.5kb upstream 500 false chr5: 43532058-43532557 Medicago truncatula
Medtr5g099290 0.5kb downstream 0.5kb downstream 6566 true chr5: 43532558-43539123 Medicago truncatula
Medtr5g099290 0.5kb downstream 0.5kb downstream 500 false chr5: 43538624-43539123 Medicago truncatula
Medtr5g099290 1.0kb upstream 1.0kb upstream 7066 true chr5: 43531558-43538623 Medicago truncatula
Medtr5g099290 1.0kb upstream 1.0kb upstream 1000 false chr5: 43531558-43532557 Medicago truncatula
Medtr5g099290 1.0kb downstream 1.0kb downstream 7066 true chr5: 43532558-43539623 Medicago truncatula
Medtr5g099290 1.0kb downstream 1.0kb downstream 1000 false chr5: 43538624-43539623 Medicago truncatula
Medtr5g099290 2.0kb upstream 2.0kb upstream 8066 true chr5: 43530558-43538623 Medicago truncatula
Medtr5g099290 2.0kb upstream 2.0kb upstream 2000 false chr5: 43530558-43532557 Medicago truncatula
Medtr5g099290 2.0kb downstream 2.0kb downstream 8066 true chr5: 43532558-43540623 Medicago truncatula
Medtr5g099290 2.0kb downstream 2.0kb downstream 2000 false chr5: 43538624-43540623 Medicago truncatula
Medtr5g099290 5.0kb upstream 5.0kb upstream 11066 true chr5: 43527558-43538623 Medicago truncatula
Medtr5g099290 5.0kb upstream 5.0kb upstream 5000 false chr5: 43527558-43532557 Medicago truncatula
Medtr5g099290 5.0kb downstream 5.0kb downstream 11066 true chr5: 43532558-43543623 Medicago truncatula
Medtr5g099290 5.0kb downstream 5.0kb downstream 5000 false chr5: 43538624-43543623 Medicago truncatula
Medtr5g099290 10.0kb upstream 10.0kb upstream 16066 true chr5: 43522558-43538623 Medicago truncatula
Medtr5g099290 10.0kb upstream 10.0kb upstream 10000 false chr5: 43522558-43532557 Medicago truncatula
Medtr5g099290 10.0kb downstream 10.0kb downstream 16066 true chr5: 43532558-43548623 Medicago truncatula
Medtr5g099290 10.0kb downstream 10.0kb downstream 10000 false chr5: 43538624-43548623 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302402 5265 Fabidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.374        
cufflinks 1.416        
cufflinks 1.793       High
cufflinks 0.258        
cufflinks 1.908       High
cufflinks 0.098     Low Low
cufflinks 0.319        
cufflinks 1.457        
cufflinks 0.281        

0 Strain