Gene : Medtr6g003970 M. truncatula Mt4.0v1
Defline:  (1 of 4) KOG1071 - Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt Description:  elongation factor Ts protein
Genomic Order:  5 Name:  ? Medtr6g003970
Secondary Identifier:  ? PAC:31103282
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g003970 0.5kb upstream 0.5kb upstream 6643 true chr6: 38080-44722 Medicago truncatula
Medtr6g003970 0.5kb upstream 0.5kb upstream 500 false chr6: 44223-44722 Medicago truncatula
Medtr6g003970 0.5kb downstream 0.5kb downstream 6643 true chr6: 37580-44222 Medicago truncatula
Medtr6g003970 0.5kb downstream 0.5kb downstream 500 false chr6: 37580-38079 Medicago truncatula
Medtr6g003970 1.0kb upstream 1.0kb upstream 7143 true chr6: 38080-45222 Medicago truncatula
Medtr6g003970 1.0kb upstream 1.0kb upstream 1000 false chr6: 44223-45222 Medicago truncatula
Medtr6g003970 1.0kb downstream 1.0kb downstream 7143 true chr6: 37080-44222 Medicago truncatula
Medtr6g003970 1.0kb downstream 1.0kb downstream 1000 false chr6: 37080-38079 Medicago truncatula
Medtr6g003970 2.0kb upstream 2.0kb upstream 8143 true chr6: 38080-46222 Medicago truncatula
Medtr6g003970 2.0kb upstream 2.0kb upstream 2000 false chr6: 44223-46222 Medicago truncatula
Medtr6g003970 2.0kb downstream 2.0kb downstream 8143 true chr6: 36080-44222 Medicago truncatula
Medtr6g003970 2.0kb downstream 2.0kb downstream 2000 false chr6: 36080-38079 Medicago truncatula
Medtr6g003970 5.0kb upstream 5.0kb upstream 11143 true chr6: 38080-49222 Medicago truncatula
Medtr6g003970 5.0kb upstream 5.0kb upstream 5000 false chr6: 44223-49222 Medicago truncatula
Medtr6g003970 5.0kb downstream 5.0kb downstream 11143 true chr6: 33080-44222 Medicago truncatula
Medtr6g003970 5.0kb downstream 5.0kb downstream 5000 false chr6: 33080-38079 Medicago truncatula
Medtr6g003970 10.0kb upstream 10.0kb upstream 16143 true chr6: 38080-54222 Medicago truncatula
Medtr6g003970 10.0kb upstream 10.0kb upstream 10000 false chr6: 44223-54222 Medicago truncatula
Medtr6g003970 10.0kb downstream 10.0kb downstream 16143 true chr6: 28080-44222 Medicago truncatula
Medtr6g003970 10.0kb downstream 10.0kb downstream 10000 false chr6: 28080-38079 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306299 5265 Fabidae View MSA
124066147 5270 Rosid View MSA
123739462 5271 Pentapetalae View MSA
122788886 5272 Eudicot View MSA
122045608 5273 Angiosperm View MSA
121344027 5274 Embryophyte View MSA
123428699 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.398        
cufflinks 3.361        
cufflinks 4.739        
cufflinks 3.172        
cufflinks 5.976        
cufflinks 1.358       Low
cufflinks 4.03        
cufflinks 4.628        
cufflinks 6.488       High

0 Strain