Gene : Medtr5g464770 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Description:  EMG1/NEP1 methyltransferase
Genomic Order:  3433 Name:  ? Medtr5g464770
Secondary Identifier:  ? PAC:31087086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g464770 0.5kb upstream 0.5kb upstream 2699 true chr5: 26913445-26916143 Medicago truncatula
Medtr5g464770 0.5kb upstream 0.5kb upstream 500 false chr5: 26915644-26916143 Medicago truncatula
Medtr5g464770 0.5kb downstream 0.5kb downstream 2699 true chr5: 26912945-26915643 Medicago truncatula
Medtr5g464770 0.5kb downstream 0.5kb downstream 500 false chr5: 26912945-26913444 Medicago truncatula
Medtr5g464770 1.0kb upstream 1.0kb upstream 3199 true chr5: 26913445-26916643 Medicago truncatula
Medtr5g464770 1.0kb upstream 1.0kb upstream 1000 false chr5: 26915644-26916643 Medicago truncatula
Medtr5g464770 1.0kb downstream 1.0kb downstream 3199 true chr5: 26912445-26915643 Medicago truncatula
Medtr5g464770 1.0kb downstream 1.0kb downstream 1000 false chr5: 26912445-26913444 Medicago truncatula
Medtr5g464770 2.0kb upstream 2.0kb upstream 4199 true chr5: 26913445-26917643 Medicago truncatula
Medtr5g464770 2.0kb upstream 2.0kb upstream 2000 false chr5: 26915644-26917643 Medicago truncatula
Medtr5g464770 2.0kb downstream 2.0kb downstream 4199 true chr5: 26911445-26915643 Medicago truncatula
Medtr5g464770 2.0kb downstream 2.0kb downstream 2000 false chr5: 26911445-26913444 Medicago truncatula
Medtr5g464770 5.0kb upstream 5.0kb upstream 7199 true chr5: 26913445-26920643 Medicago truncatula
Medtr5g464770 5.0kb upstream 5.0kb upstream 5000 false chr5: 26915644-26920643 Medicago truncatula
Medtr5g464770 5.0kb downstream 5.0kb downstream 7199 true chr5: 26908445-26915643 Medicago truncatula
Medtr5g464770 5.0kb downstream 5.0kb downstream 5000 false chr5: 26908445-26913444 Medicago truncatula
Medtr5g464770 10.0kb upstream 10.0kb upstream 12199 true chr5: 26913445-26925643 Medicago truncatula
Medtr5g464770 10.0kb upstream 10.0kb upstream 10000 false chr5: 26915644-26925643 Medicago truncatula
Medtr5g464770 10.0kb downstream 10.0kb downstream 12199 true chr5: 26903445-26915643 Medicago truncatula
Medtr5g464770 10.0kb downstream 10.0kb downstream 10000 false chr5: 26903445-26913444 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027374 5273 Angiosperm View MSA
122313066 5265 Fabidae View MSA
124074207 5270 Rosid View MSA
123742956 5271 Pentapetalae View MSA
122796671 5272 Eudicot View MSA
121349170 5274 Embryophyte View MSA
123381197 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.239       Low
cufflinks 0.419        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.584       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.407        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain