Gene : Medtr6g005580 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Description:  DNA (cytosine-5)-methyltransferase DRM1/2
Genomic Order:  116 Name:  ? Medtr6g005580
Secondary Identifier:  ? PAC:31105607
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005580 0.5kb upstream 0.5kb upstream 10356 true chr6: 828430-838785 Medicago truncatula
Medtr6g005580 0.5kb upstream 0.5kb upstream 500 false chr6: 838286-838785 Medicago truncatula
Medtr6g005580 0.5kb downstream 0.5kb downstream 10356 true chr6: 827930-838285 Medicago truncatula
Medtr6g005580 0.5kb downstream 0.5kb downstream 500 false chr6: 827930-828429 Medicago truncatula
Medtr6g005580 1.0kb upstream 1.0kb upstream 10856 true chr6: 828430-839285 Medicago truncatula
Medtr6g005580 1.0kb upstream 1.0kb upstream 1000 false chr6: 838286-839285 Medicago truncatula
Medtr6g005580 1.0kb downstream 1.0kb downstream 10856 true chr6: 827430-838285 Medicago truncatula
Medtr6g005580 1.0kb downstream 1.0kb downstream 1000 false chr6: 827430-828429 Medicago truncatula
Medtr6g005580 2.0kb upstream 2.0kb upstream 11856 true chr6: 828430-840285 Medicago truncatula
Medtr6g005580 2.0kb upstream 2.0kb upstream 2000 false chr6: 838286-840285 Medicago truncatula
Medtr6g005580 2.0kb downstream 2.0kb downstream 11856 true chr6: 826430-838285 Medicago truncatula
Medtr6g005580 2.0kb downstream 2.0kb downstream 2000 false chr6: 826430-828429 Medicago truncatula
Medtr6g005580 5.0kb upstream 5.0kb upstream 14856 true chr6: 828430-843285 Medicago truncatula
Medtr6g005580 5.0kb upstream 5.0kb upstream 5000 false chr6: 838286-843285 Medicago truncatula
Medtr6g005580 5.0kb downstream 5.0kb downstream 14856 true chr6: 823430-838285 Medicago truncatula
Medtr6g005580 5.0kb downstream 5.0kb downstream 5000 false chr6: 823430-828429 Medicago truncatula
Medtr6g005580 10.0kb upstream 10.0kb upstream 19856 true chr6: 828430-848285 Medicago truncatula
Medtr6g005580 10.0kb upstream 10.0kb upstream 10000 false chr6: 838286-848285 Medicago truncatula
Medtr6g005580 10.0kb downstream 10.0kb downstream 19856 true chr6: 818430-838285 Medicago truncatula
Medtr6g005580 10.0kb downstream 10.0kb downstream 10000 false chr6: 818430-828429 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311248 5265 Fabidae View MSA
124062012 5270 Rosid View MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.569        
cufflinks 3.021        
cufflinks 4.558       High
cufflinks 0.669       Low
cufflinks 3.601        
cufflinks 0.448       Low
cufflinks 1.232        
cufflinks 4.229        
cufflinks 1.282        

0 Strain