Gene : Medtr6g005330 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Description:  germin family protein
Genomic Order:  98 Name:  ? Medtr6g005330
Secondary Identifier:  ? PAC:31104968
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005330 0.5kb upstream 0.5kb upstream 1444 true chr6: 710480-711923 Medicago truncatula
Medtr6g005330 0.5kb upstream 0.5kb upstream 500 false chr6: 711424-711923 Medicago truncatula
Medtr6g005330 0.5kb downstream 0.5kb downstream 1444 true chr6: 709980-711423 Medicago truncatula
Medtr6g005330 0.5kb downstream 0.5kb downstream 500 false chr6: 709980-710479 Medicago truncatula
Medtr6g005330 1.0kb upstream 1.0kb upstream 1944 true chr6: 710480-712423 Medicago truncatula
Medtr6g005330 1.0kb upstream 1.0kb upstream 1000 false chr6: 711424-712423 Medicago truncatula
Medtr6g005330 1.0kb downstream 1.0kb downstream 1944 true chr6: 709480-711423 Medicago truncatula
Medtr6g005330 1.0kb downstream 1.0kb downstream 1000 false chr6: 709480-710479 Medicago truncatula
Medtr6g005330 2.0kb upstream 2.0kb upstream 2944 true chr6: 710480-713423 Medicago truncatula
Medtr6g005330 2.0kb upstream 2.0kb upstream 2000 false chr6: 711424-713423 Medicago truncatula
Medtr6g005330 2.0kb downstream 2.0kb downstream 2944 true chr6: 708480-711423 Medicago truncatula
Medtr6g005330 2.0kb downstream 2.0kb downstream 2000 false chr6: 708480-710479 Medicago truncatula
Medtr6g005330 5.0kb upstream 5.0kb upstream 5944 true chr6: 710480-716423 Medicago truncatula
Medtr6g005330 5.0kb upstream 5.0kb upstream 5000 false chr6: 711424-716423 Medicago truncatula
Medtr6g005330 5.0kb downstream 5.0kb downstream 5944 true chr6: 705480-711423 Medicago truncatula
Medtr6g005330 5.0kb downstream 5.0kb downstream 5000 false chr6: 705480-710479 Medicago truncatula
Medtr6g005330 10.0kb upstream 10.0kb upstream 10944 true chr6: 710480-721423 Medicago truncatula
Medtr6g005330 10.0kb upstream 10.0kb upstream 10000 false chr6: 711424-721423 Medicago truncatula
Medtr6g005330 10.0kb downstream 10.0kb downstream 10944 true chr6: 700480-711423 Medicago truncatula
Medtr6g005330 10.0kb downstream 10.0kb downstream 10000 false chr6: 700480-710479 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.35        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.113       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.573     High  
cufflinks 20.754     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.389     High  

0 Strain