Gene : Medtr6g005390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF01903 - CbiX (CbiX) Description:  sirohydrochlorin ferrochelatase
Genomic Order:  103 Name:  ? Medtr6g005390
Secondary Identifier:  ? PAC:31104669
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005390 0.5kb upstream 0.5kb upstream 5234 true chr6: 723472-728705 Medicago truncatula
Medtr6g005390 0.5kb upstream 0.5kb upstream 500 false chr6: 723472-723971 Medicago truncatula
Medtr6g005390 0.5kb downstream 0.5kb downstream 5234 true chr6: 723972-729205 Medicago truncatula
Medtr6g005390 0.5kb downstream 0.5kb downstream 500 false chr6: 728706-729205 Medicago truncatula
Medtr6g005390 1.0kb upstream 1.0kb upstream 5734 true chr6: 722972-728705 Medicago truncatula
Medtr6g005390 1.0kb upstream 1.0kb upstream 1000 false chr6: 722972-723971 Medicago truncatula
Medtr6g005390 1.0kb downstream 1.0kb downstream 5734 true chr6: 723972-729705 Medicago truncatula
Medtr6g005390 1.0kb downstream 1.0kb downstream 1000 false chr6: 728706-729705 Medicago truncatula
Medtr6g005390 2.0kb upstream 2.0kb upstream 6734 true chr6: 721972-728705 Medicago truncatula
Medtr6g005390 2.0kb upstream 2.0kb upstream 2000 false chr6: 721972-723971 Medicago truncatula
Medtr6g005390 2.0kb downstream 2.0kb downstream 6734 true chr6: 723972-730705 Medicago truncatula
Medtr6g005390 2.0kb downstream 2.0kb downstream 2000 false chr6: 728706-730705 Medicago truncatula
Medtr6g005390 5.0kb upstream 5.0kb upstream 9734 true chr6: 718972-728705 Medicago truncatula
Medtr6g005390 5.0kb upstream 5.0kb upstream 5000 false chr6: 718972-723971 Medicago truncatula
Medtr6g005390 5.0kb downstream 5.0kb downstream 9734 true chr6: 723972-733705 Medicago truncatula
Medtr6g005390 5.0kb downstream 5.0kb downstream 5000 false chr6: 728706-733705 Medicago truncatula
Medtr6g005390 10.0kb upstream 10.0kb upstream 14734 true chr6: 713972-728705 Medicago truncatula
Medtr6g005390 10.0kb upstream 10.0kb upstream 10000 false chr6: 713972-723971 Medicago truncatula
Medtr6g005390 10.0kb downstream 10.0kb downstream 14734 true chr6: 723972-738705 Medicago truncatula
Medtr6g005390 10.0kb downstream 10.0kb downstream 10000 false chr6: 728706-738705 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300225 5265 Fabidae View MSA
124063456 5270 Rosid View MSA
123740171 5271 Pentapetalae View MSA
122786362 5272 Eudicot View MSA
122045035 5273 Angiosperm View MSA
123429085 5275 Viridiplantae View MSA
121345906 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299       Low
cufflinks 0.678        
cufflinks 1.036       High
cufflinks 0.432        
cufflinks 1.256       High
cufflinks 0.354       Low
cufflinks 0.514        
cufflinks 0.879        
cufflinks 0.604        

0 Strain