Gene : Medtr6g005360 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Description:  germin family protein
Genomic Order:  101 Name:  ? Medtr6g005360
Secondary Identifier:  ? PAC:31103558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005360 0.5kb upstream 0.5kb upstream 1564 true chr6: 717382-718945 Medicago truncatula
Medtr6g005360 0.5kb upstream 0.5kb upstream 500 false chr6: 718446-718945 Medicago truncatula
Medtr6g005360 0.5kb downstream 0.5kb downstream 1564 true chr6: 716882-718445 Medicago truncatula
Medtr6g005360 0.5kb downstream 0.5kb downstream 500 false chr6: 716882-717381 Medicago truncatula
Medtr6g005360 1.0kb upstream 1.0kb upstream 2064 true chr6: 717382-719445 Medicago truncatula
Medtr6g005360 1.0kb upstream 1.0kb upstream 1000 false chr6: 718446-719445 Medicago truncatula
Medtr6g005360 1.0kb downstream 1.0kb downstream 2064 true chr6: 716382-718445 Medicago truncatula
Medtr6g005360 1.0kb downstream 1.0kb downstream 1000 false chr6: 716382-717381 Medicago truncatula
Medtr6g005360 2.0kb upstream 2.0kb upstream 3064 true chr6: 717382-720445 Medicago truncatula
Medtr6g005360 2.0kb upstream 2.0kb upstream 2000 false chr6: 718446-720445 Medicago truncatula
Medtr6g005360 2.0kb downstream 2.0kb downstream 3064 true chr6: 715382-718445 Medicago truncatula
Medtr6g005360 2.0kb downstream 2.0kb downstream 2000 false chr6: 715382-717381 Medicago truncatula
Medtr6g005360 5.0kb upstream 5.0kb upstream 6064 true chr6: 717382-723445 Medicago truncatula
Medtr6g005360 5.0kb upstream 5.0kb upstream 5000 false chr6: 718446-723445 Medicago truncatula
Medtr6g005360 5.0kb downstream 5.0kb downstream 6064 true chr6: 712382-718445 Medicago truncatula
Medtr6g005360 5.0kb downstream 5.0kb downstream 5000 false chr6: 712382-717381 Medicago truncatula
Medtr6g005360 10.0kb upstream 10.0kb upstream 11064 true chr6: 717382-728445 Medicago truncatula
Medtr6g005360 10.0kb upstream 10.0kb upstream 10000 false chr6: 718446-728445 Medicago truncatula
Medtr6g005360 10.0kb downstream 10.0kb downstream 11064 true chr6: 707382-718445 Medicago truncatula
Medtr6g005360 10.0kb downstream 10.0kb downstream 10000 false chr6: 707382-717381 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.139     High  
cufflinks 0.013     Low Low
cufflinks 0.014     Low Low
cufflinks 11.45     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 45.211     High  
cufflinks 32.182     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.458     High  

0 Strain