Gene : Medtr6g005080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Description:  lateral organ boundaries (LOB) domain protein
Genomic Order:  87 Name:  ? Medtr6g005080
Secondary Identifier:  ? PAC:31105459
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005080 0.5kb upstream 0.5kb upstream 2345 true chr6: 598905-601249 Medicago truncatula
Medtr6g005080 0.5kb upstream 0.5kb upstream 500 false chr6: 598905-599404 Medicago truncatula
Medtr6g005080 0.5kb downstream 0.5kb downstream 2345 true chr6: 599405-601749 Medicago truncatula
Medtr6g005080 0.5kb downstream 0.5kb downstream 500 false chr6: 601250-601749 Medicago truncatula
Medtr6g005080 1.0kb upstream 1.0kb upstream 2845 true chr6: 598405-601249 Medicago truncatula
Medtr6g005080 1.0kb upstream 1.0kb upstream 1000 false chr6: 598405-599404 Medicago truncatula
Medtr6g005080 1.0kb downstream 1.0kb downstream 2845 true chr6: 599405-602249 Medicago truncatula
Medtr6g005080 1.0kb downstream 1.0kb downstream 1000 false chr6: 601250-602249 Medicago truncatula
Medtr6g005080 2.0kb upstream 2.0kb upstream 3845 true chr6: 597405-601249 Medicago truncatula
Medtr6g005080 2.0kb upstream 2.0kb upstream 2000 false chr6: 597405-599404 Medicago truncatula
Medtr6g005080 2.0kb downstream 2.0kb downstream 3845 true chr6: 599405-603249 Medicago truncatula
Medtr6g005080 2.0kb downstream 2.0kb downstream 2000 false chr6: 601250-603249 Medicago truncatula
Medtr6g005080 5.0kb upstream 5.0kb upstream 6845 true chr6: 594405-601249 Medicago truncatula
Medtr6g005080 5.0kb upstream 5.0kb upstream 5000 false chr6: 594405-599404 Medicago truncatula
Medtr6g005080 5.0kb downstream 5.0kb downstream 6845 true chr6: 599405-606249 Medicago truncatula
Medtr6g005080 5.0kb downstream 5.0kb downstream 5000 false chr6: 601250-606249 Medicago truncatula
Medtr6g005080 10.0kb upstream 10.0kb upstream 11845 true chr6: 589405-601249 Medicago truncatula
Medtr6g005080 10.0kb upstream 10.0kb upstream 10000 false chr6: 589405-599404 Medicago truncatula
Medtr6g005080 10.0kb downstream 10.0kb downstream 11845 true chr6: 599405-611249 Medicago truncatula
Medtr6g005080 10.0kb downstream 10.0kb downstream 10000 false chr6: 601250-611249 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315754 5265 Fabidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.284        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 24.065     High High
cufflinks 0.027     Low Low
cufflinks 18.052     High High
cufflinks 9.0        
cufflinks 0.049     Low  
cufflinks 2.238        

0 Strain