Gene : Medtr6g005070 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Description:  lateral organ boundaries (LOB) domain protein
Genomic Order:  86 Name:  ? Medtr6g005070
Secondary Identifier:  ? PAC:31102210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005070 0.5kb upstream 0.5kb upstream 2230 true chr6: 589667-591896 Medicago truncatula
Medtr6g005070 0.5kb upstream 0.5kb upstream 500 false chr6: 589667-590166 Medicago truncatula
Medtr6g005070 0.5kb downstream 0.5kb downstream 2230 true chr6: 590167-592396 Medicago truncatula
Medtr6g005070 0.5kb downstream 0.5kb downstream 500 false chr6: 591897-592396 Medicago truncatula
Medtr6g005070 1.0kb upstream 1.0kb upstream 2730 true chr6: 589167-591896 Medicago truncatula
Medtr6g005070 1.0kb upstream 1.0kb upstream 1000 false chr6: 589167-590166 Medicago truncatula
Medtr6g005070 1.0kb downstream 1.0kb downstream 2730 true chr6: 590167-592896 Medicago truncatula
Medtr6g005070 1.0kb downstream 1.0kb downstream 1000 false chr6: 591897-592896 Medicago truncatula
Medtr6g005070 2.0kb upstream 2.0kb upstream 3730 true chr6: 588167-591896 Medicago truncatula
Medtr6g005070 2.0kb upstream 2.0kb upstream 2000 false chr6: 588167-590166 Medicago truncatula
Medtr6g005070 2.0kb downstream 2.0kb downstream 3730 true chr6: 590167-593896 Medicago truncatula
Medtr6g005070 2.0kb downstream 2.0kb downstream 2000 false chr6: 591897-593896 Medicago truncatula
Medtr6g005070 5.0kb upstream 5.0kb upstream 6730 true chr6: 585167-591896 Medicago truncatula
Medtr6g005070 5.0kb upstream 5.0kb upstream 5000 false chr6: 585167-590166 Medicago truncatula
Medtr6g005070 5.0kb downstream 5.0kb downstream 6730 true chr6: 590167-596896 Medicago truncatula
Medtr6g005070 5.0kb downstream 5.0kb downstream 5000 false chr6: 591897-596896 Medicago truncatula
Medtr6g005070 10.0kb upstream 10.0kb upstream 11730 true chr6: 580167-591896 Medicago truncatula
Medtr6g005070 10.0kb upstream 10.0kb upstream 10000 false chr6: 580167-590166 Medicago truncatula
Medtr6g005070 10.0kb downstream 10.0kb downstream 11730 true chr6: 590167-601896 Medicago truncatula
Medtr6g005070 10.0kb downstream 10.0kb downstream 10000 false chr6: 591897-601896 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315754 5265 Fabidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.173       Low
cufflinks 0.697        
cufflinks 0.515        
cufflinks 5.802       High
cufflinks 0.601        
cufflinks 1.999        
cufflinks 3.345       High
cufflinks 0.42        
cufflinks 1.141        

0 Strain