Gene : Medtr6g005310 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Description:  germin family protein
Genomic Order:  96 Name:  ? Medtr6g005310
Secondary Identifier:  ? PAC:31104870
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005310 0.5kb upstream 0.5kb upstream 1540 true chr6: 702128-703667 Medicago truncatula
Medtr6g005310 0.5kb upstream 0.5kb upstream 500 false chr6: 703168-703667 Medicago truncatula
Medtr6g005310 0.5kb downstream 0.5kb downstream 1540 true chr6: 701628-703167 Medicago truncatula
Medtr6g005310 0.5kb downstream 0.5kb downstream 500 false chr6: 701628-702127 Medicago truncatula
Medtr6g005310 1.0kb upstream 1.0kb upstream 2040 true chr6: 702128-704167 Medicago truncatula
Medtr6g005310 1.0kb upstream 1.0kb upstream 1000 false chr6: 703168-704167 Medicago truncatula
Medtr6g005310 1.0kb downstream 1.0kb downstream 2040 true chr6: 701128-703167 Medicago truncatula
Medtr6g005310 1.0kb downstream 1.0kb downstream 1000 false chr6: 701128-702127 Medicago truncatula
Medtr6g005310 2.0kb upstream 2.0kb upstream 3040 true chr6: 702128-705167 Medicago truncatula
Medtr6g005310 2.0kb upstream 2.0kb upstream 2000 false chr6: 703168-705167 Medicago truncatula
Medtr6g005310 2.0kb downstream 2.0kb downstream 3040 true chr6: 700128-703167 Medicago truncatula
Medtr6g005310 2.0kb downstream 2.0kb downstream 2000 false chr6: 700128-702127 Medicago truncatula
Medtr6g005310 5.0kb upstream 5.0kb upstream 6040 true chr6: 702128-708167 Medicago truncatula
Medtr6g005310 5.0kb upstream 5.0kb upstream 5000 false chr6: 703168-708167 Medicago truncatula
Medtr6g005310 5.0kb downstream 5.0kb downstream 6040 true chr6: 697128-703167 Medicago truncatula
Medtr6g005310 5.0kb downstream 5.0kb downstream 5000 false chr6: 697128-702127 Medicago truncatula
Medtr6g005310 10.0kb upstream 10.0kb upstream 11040 true chr6: 702128-713167 Medicago truncatula
Medtr6g005310 10.0kb upstream 10.0kb upstream 10000 false chr6: 703168-713167 Medicago truncatula
Medtr6g005310 10.0kb downstream 10.0kb downstream 11040 true chr6: 692128-703167 Medicago truncatula
Medtr6g005310 10.0kb downstream 10.0kb downstream 10000 false chr6: 692128-702127 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.006     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 8.626        
cufflinks 0.022     Low Low
cufflinks 42.361     High  
cufflinks 34.881     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.949     High  

0 Strain