Gene : Medtr6g005760 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  137 Name:  ? Medtr6g005760
Secondary Identifier:  ? PAC:31102757
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g005760 0.5kb upstream 0.5kb upstream 6711 true chr6: 1004961-1011671 Medicago truncatula
Medtr6g005760 0.5kb upstream 0.5kb upstream 500 false chr6: 1004961-1005460 Medicago truncatula
Medtr6g005760 0.5kb downstream 0.5kb downstream 6711 true chr6: 1005461-1012171 Medicago truncatula
Medtr6g005760 0.5kb downstream 0.5kb downstream 500 false chr6: 1011672-1012171 Medicago truncatula
Medtr6g005760 1.0kb upstream 1.0kb upstream 7211 true chr6: 1004461-1011671 Medicago truncatula
Medtr6g005760 1.0kb upstream 1.0kb upstream 1000 false chr6: 1004461-1005460 Medicago truncatula
Medtr6g005760 1.0kb downstream 1.0kb downstream 7211 true chr6: 1005461-1012671 Medicago truncatula
Medtr6g005760 1.0kb downstream 1.0kb downstream 1000 false chr6: 1011672-1012671 Medicago truncatula
Medtr6g005760 2.0kb upstream 2.0kb upstream 8211 true chr6: 1003461-1011671 Medicago truncatula
Medtr6g005760 2.0kb upstream 2.0kb upstream 2000 false chr6: 1003461-1005460 Medicago truncatula
Medtr6g005760 2.0kb downstream 2.0kb downstream 8211 true chr6: 1005461-1013671 Medicago truncatula
Medtr6g005760 2.0kb downstream 2.0kb downstream 2000 false chr6: 1011672-1013671 Medicago truncatula
Medtr6g005760 5.0kb upstream 5.0kb upstream 11211 true chr6: 1000461-1011671 Medicago truncatula
Medtr6g005760 5.0kb upstream 5.0kb upstream 5000 false chr6: 1000461-1005460 Medicago truncatula
Medtr6g005760 5.0kb downstream 5.0kb downstream 11211 true chr6: 1005461-1016671 Medicago truncatula
Medtr6g005760 5.0kb downstream 5.0kb downstream 5000 false chr6: 1011672-1016671 Medicago truncatula
Medtr6g005760 10.0kb upstream 10.0kb upstream 16211 true chr6: 995461-1011671 Medicago truncatula
Medtr6g005760 10.0kb upstream 10.0kb upstream 10000 false chr6: 995461-1005460 Medicago truncatula
Medtr6g005760 10.0kb downstream 10.0kb downstream 16211 true chr6: 1005461-1021671 Medicago truncatula
Medtr6g005760 10.0kb downstream 10.0kb downstream 10000 false chr6: 1011672-1021671 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306849 5265 Fabidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.616        
cufflinks 0.535        
cufflinks 0.476        
cufflinks 0.122       Low
cufflinks 0.985       High
cufflinks 0.097     Low Low
cufflinks 0.374        
cufflinks 0.59        
cufflinks 0.415        

0 Strain