Gene : Medtr6g004840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23019 - NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED Description:  embryo defective 3012 protein
Genomic Order:  71 Name:  ? Medtr6g004840
Secondary Identifier:  ? PAC:31103807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g004840 0.5kb upstream 0.5kb upstream 25717 true chr6: 447422-473138 Medicago truncatula
Medtr6g004840 0.5kb upstream 0.5kb upstream 500 false chr6: 472639-473138 Medicago truncatula
Medtr6g004840 0.5kb downstream 0.5kb downstream 25717 true chr6: 446922-472638 Medicago truncatula
Medtr6g004840 0.5kb downstream 0.5kb downstream 500 false chr6: 446922-447421 Medicago truncatula
Medtr6g004840 1.0kb upstream 1.0kb upstream 26217 true chr6: 447422-473638 Medicago truncatula
Medtr6g004840 1.0kb upstream 1.0kb upstream 1000 false chr6: 472639-473638 Medicago truncatula
Medtr6g004840 1.0kb downstream 1.0kb downstream 26217 true chr6: 446422-472638 Medicago truncatula
Medtr6g004840 1.0kb downstream 1.0kb downstream 1000 false chr6: 446422-447421 Medicago truncatula
Medtr6g004840 2.0kb upstream 2.0kb upstream 27217 true chr6: 447422-474638 Medicago truncatula
Medtr6g004840 2.0kb upstream 2.0kb upstream 2000 false chr6: 472639-474638 Medicago truncatula
Medtr6g004840 2.0kb downstream 2.0kb downstream 27217 true chr6: 445422-472638 Medicago truncatula
Medtr6g004840 2.0kb downstream 2.0kb downstream 2000 false chr6: 445422-447421 Medicago truncatula
Medtr6g004840 5.0kb upstream 5.0kb upstream 30217 true chr6: 447422-477638 Medicago truncatula
Medtr6g004840 5.0kb upstream 5.0kb upstream 5000 false chr6: 472639-477638 Medicago truncatula
Medtr6g004840 5.0kb downstream 5.0kb downstream 30217 true chr6: 442422-472638 Medicago truncatula
Medtr6g004840 5.0kb downstream 5.0kb downstream 5000 false chr6: 442422-447421 Medicago truncatula
Medtr6g004840 10.0kb upstream 10.0kb upstream 35217 true chr6: 447422-482638 Medicago truncatula
Medtr6g004840 10.0kb upstream 10.0kb upstream 10000 false chr6: 472639-482638 Medicago truncatula
Medtr6g004840 10.0kb downstream 10.0kb downstream 35217 true chr6: 437422-472638 Medicago truncatula
Medtr6g004840 10.0kb downstream 10.0kb downstream 10000 false chr6: 437422-447421 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302870 5265 Fabidae View MSA
124050751 5270 Rosid View MSA
123750800 5271 Pentapetalae View MSA
122787640 5272 Eudicot View MSA
122045642 5273 Angiosperm View MSA
121344134 5274 Embryophyte View MSA
123379983 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.567        
cufflinks 0.75        
cufflinks 1.222        
cufflinks 0.172       Low
cufflinks 3.22       High
cufflinks 0.158       Low
cufflinks 0.49        
cufflinks 1.178        
cufflinks 0.539        

0 Strain