Gene : Medtr6g004430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10457:SF13 - GLUCURONOKINASE 1-RELATED Description:  GHMP kinase ATP-binding protein, putative
Genomic Order:  43 Name:  ? Medtr6g004430
Secondary Identifier:  ? PAC:31101434
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g004430 0.5kb upstream 0.5kb upstream 4540 true chr6: 272083-276622 Medicago truncatula
Medtr6g004430 0.5kb upstream 0.5kb upstream 500 false chr6: 276123-276622 Medicago truncatula
Medtr6g004430 0.5kb downstream 0.5kb downstream 4540 true chr6: 271583-276122 Medicago truncatula
Medtr6g004430 0.5kb downstream 0.5kb downstream 500 false chr6: 271583-272082 Medicago truncatula
Medtr6g004430 1.0kb upstream 1.0kb upstream 5040 true chr6: 272083-277122 Medicago truncatula
Medtr6g004430 1.0kb upstream 1.0kb upstream 1000 false chr6: 276123-277122 Medicago truncatula
Medtr6g004430 1.0kb downstream 1.0kb downstream 5040 true chr6: 271083-276122 Medicago truncatula
Medtr6g004430 1.0kb downstream 1.0kb downstream 1000 false chr6: 271083-272082 Medicago truncatula
Medtr6g004430 2.0kb upstream 2.0kb upstream 6040 true chr6: 272083-278122 Medicago truncatula
Medtr6g004430 2.0kb upstream 2.0kb upstream 2000 false chr6: 276123-278122 Medicago truncatula
Medtr6g004430 2.0kb downstream 2.0kb downstream 6040 true chr6: 270083-276122 Medicago truncatula
Medtr6g004430 2.0kb downstream 2.0kb downstream 2000 false chr6: 270083-272082 Medicago truncatula
Medtr6g004430 5.0kb upstream 5.0kb upstream 9040 true chr6: 272083-281122 Medicago truncatula
Medtr6g004430 5.0kb upstream 5.0kb upstream 5000 false chr6: 276123-281122 Medicago truncatula
Medtr6g004430 5.0kb downstream 5.0kb downstream 9040 true chr6: 267083-276122 Medicago truncatula
Medtr6g004430 5.0kb downstream 5.0kb downstream 5000 false chr6: 267083-272082 Medicago truncatula
Medtr6g004430 10.0kb upstream 10.0kb upstream 14040 true chr6: 272083-286122 Medicago truncatula
Medtr6g004430 10.0kb upstream 10.0kb upstream 10000 false chr6: 276123-286122 Medicago truncatula
Medtr6g004430 10.0kb downstream 10.0kb downstream 14040 true chr6: 262083-276122 Medicago truncatula
Medtr6g004430 10.0kb downstream 10.0kb downstream 10000 false chr6: 262083-272082 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306555 5265 Fabidae View MSA
124064106 5270 Rosid View MSA
123739248 5271 Pentapetalae View MSA
122786002 5272 Eudicot View MSA
122043026 5273 Angiosperm View MSA
121345002 5274 Embryophyte View MSA
123424752 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.445     High  
cufflinks 40.438     High  
cufflinks 51.697     High  
cufflinks 62.933     High  
cufflinks 16.853     High Low
cufflinks 47.16     High  
cufflinks 133.648     High High
cufflinks 64.707     High  
cufflinks 79.206     High  

0 Strain