Gene : Medtr6g004420 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  42
Name:  ? Medtr6g004420 Secondary Identifier:  ? PAC:31104427
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g004420 0.5kb upstream 0.5kb upstream 2902 true chr6: 268737-271638 Medicago truncatula
Medtr6g004420 0.5kb upstream 0.5kb upstream 500 false chr6: 268737-269236 Medicago truncatula
Medtr6g004420 0.5kb downstream 0.5kb downstream 2902 true chr6: 269237-272138 Medicago truncatula
Medtr6g004420 0.5kb downstream 0.5kb downstream 500 false chr6: 271639-272138 Medicago truncatula
Medtr6g004420 1.0kb upstream 1.0kb upstream 3402 true chr6: 268237-271638 Medicago truncatula
Medtr6g004420 1.0kb upstream 1.0kb upstream 1000 false chr6: 268237-269236 Medicago truncatula
Medtr6g004420 1.0kb downstream 1.0kb downstream 3402 true chr6: 269237-272638 Medicago truncatula
Medtr6g004420 1.0kb downstream 1.0kb downstream 1000 false chr6: 271639-272638 Medicago truncatula
Medtr6g004420 2.0kb upstream 2.0kb upstream 4402 true chr6: 267237-271638 Medicago truncatula
Medtr6g004420 2.0kb upstream 2.0kb upstream 2000 false chr6: 267237-269236 Medicago truncatula
Medtr6g004420 2.0kb downstream 2.0kb downstream 4402 true chr6: 269237-273638 Medicago truncatula
Medtr6g004420 2.0kb downstream 2.0kb downstream 2000 false chr6: 271639-273638 Medicago truncatula
Medtr6g004420 5.0kb upstream 5.0kb upstream 7402 true chr6: 264237-271638 Medicago truncatula
Medtr6g004420 5.0kb upstream 5.0kb upstream 5000 false chr6: 264237-269236 Medicago truncatula
Medtr6g004420 5.0kb downstream 5.0kb downstream 7402 true chr6: 269237-276638 Medicago truncatula
Medtr6g004420 5.0kb downstream 5.0kb downstream 5000 false chr6: 271639-276638 Medicago truncatula
Medtr6g004420 10.0kb upstream 10.0kb upstream 12402 true chr6: 259237-271638 Medicago truncatula
Medtr6g004420 10.0kb upstream 10.0kb upstream 10000 false chr6: 259237-269236 Medicago truncatula
Medtr6g004420 10.0kb downstream 10.0kb downstream 12402 true chr6: 269237-281638 Medicago truncatula
Medtr6g004420 10.0kb downstream 10.0kb downstream 10000 false chr6: 271639-281638 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304550 5265 Fabidae View MSA
124060553 5270 Rosid View MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.787        
cufflinks 0.652        
cufflinks 0.699        
cufflinks 0.274       Low
cufflinks 1.008        
cufflinks 0.127     Low Low
cufflinks 0.766        
cufflinks 0.728        
cufflinks 0.66        

0 Strain